y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G122200.1 |
Family | GH3 |
Protein Properties | Length: 771 Molecular Weight: 82948.5 Isoelectric Point: 8.0719 |
Chromosome | Chromosome/Scaffold: 14 Start: 9455916 End: 9460246 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 73 | 320 | 0 |
AAVPRLRIKGYEWWSEALHGVSNVGPGTKFGGAFPVATSFPQVITTAASFNATLWEAIGQVVSDEARAMFNGGVAGLTYWSPNVNIFRDPRWGRGQETPG EDPVVVGKYAASYVRGLQGSDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAEVSKQDMEDTFDVPFRMCVKEGKVASVMCSYNQVNGIPTCADPNLLKK TVRGQWRLDGYIVSDCDSVGVYYGQQHYTSTPEEAASDAIKAGLDLDC |
Full Sequence |
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Protein Sequence Length: 771 Download |
MPTSFIITLS VLFLGVSLQT SKALDPFACD PKDGTTRDLP FCQVKLPIQT RVNDLIGRMT 60 LQEKVGLLVN NAAAVPRLRI KGYEWWSEAL HGVSNVGPGT KFGGAFPVAT SFPQVITTAA 120 SFNATLWEAI GQVVSDEARA MFNGGVAGLT YWSPNVNIFR DPRWGRGQET PGEDPVVVGK 180 YAASYVRGLQ GSDGNRLKVA ACCKHFTAYD LDNWNGVDRF HFNAEVSKQD MEDTFDVPFR 240 MCVKEGKVAS VMCSYNQVNG IPTCADPNLL KKTVRGQWRL DGYIVSDCDS VGVYYGQQHY 300 TSTPEEAASD AIKAGLDLDC GPFLGQHTED AVKKGLLNEA EINNALLNTL TVQMRLGMFD 360 GEPSSQLYGN LGPNDVCTPA HQELALEAAR QGIVLLKNHG PSLPLSTRRH LSVAIVGPNS 420 NVTATMIGNY AGLACGYTTP LQGIQRYAQT IHRQGCADVA CVSDQQFSAA IDAARQADAT 480 VLVMGLDQSI EAEFRDRTGL LLPGRQQELV SKVAAASKGP TILVLMSGGP IDVSFAENDP 540 KIGSIVWAGY PGQAGGAAIS DVLFGITNPG GKLPMTWYPQ DYITNLPMTN MAMRSSKSKG 600 YPGRTYRFYK GKVVYPFGHG ISYTNFVHTI ASAPTMVSVP LDGHRHGSGN ATISGKAIRV 660 THARCNRLSL GMQVDVKNTG SMDGTHTLLV YSRPPARHWA PHKQLVAFEK VHVAAGTQQR 720 VGINIHVCKS LSVVDGSGIR RIPMGEHSLH IGDVKHSVSL QASILGVVES * 780 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 1.0e-50 | 70 | 456 | 392 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam01915 | Glyco_hydro_3_C | 6.0e-55 | 393 | 624 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 6.0e-61 | 60 | 335 | 305 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 3.0e-69 | 7 | 725 | 808 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 762 | 783 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 4 | 770 | 2 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 4 | 770 | 7 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 3 | 770 | 9 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320310.1 | 0 | 132 | 770 | 2 | 635 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 20 | 770 | 21 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 110 | 725 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u48_A | 0 | 110 | 725 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_B | 0 | 110 | 725 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_A | 0 | 110 | 725 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2x41_A | 3.99931e-42 | 51 | 764 | 3 | 711 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |