Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G122200.2 |
Family | GH3 |
Protein Properties | Length: 766 Molecular Weight: 82627.6 Isoelectric Point: 8.8865 |
Chromosome | Chromosome/Scaffold: 14 Start: 9455916 End: 9460246 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 73 | 278 | 0 |
AAVPRLRIKGYEWWSEALHGVSNVGPGTKFGGAFPVATSFPQVITTAASFNATLWEAIGQVVSDEARAMFNGGVAGLTYWSPNVNIFRDPRWGRGQETPG EDPVVVGKYAASYVRGLQGSDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAEVSKQDMEDTFDVPFRMCVKEGKVASVMCSYNQVNGIPTCADPNLLKK TVRGTL |
Full Sequence |
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Protein Sequence Length: 766 Download |
MPTSFIITLS VLFLGVSLQT SKALDPFACD PKDGTTRDLP FCQVKLPIQT RVNDLIGRMT 60 LQEKVGLLVN NAAAVPRLRI KGYEWWSEAL HGVSNVGPGT KFGGAFPVAT SFPQVITTAA 120 SFNATLWEAI GQVVSDEARA MFNGGVAGLT YWSPNVNIFR DPRWGRGQET PGEDPVVVGK 180 YAASYVRGLQ GSDGNRLKVA ACCKHFTAYD LDNWNGVDRF HFNAEVSKQD MEDTFDVPFR 240 MCVKEGKVAS VMCSYNQVNG IPTCADPNLL KKTVRGTLFQ TVTLLEFIMG SNTILQPRRK 300 QPRMLLKQAS LDLDCGPFLG QHTEDAVKKG LLNEAEINNA LLNTLTVQMR LGMFDGEPSS 360 QLYGNLGPND VCTPAHQELA LEAARQGIVL LKNHGPSLPL STRRHLSVAI VGPNSNVTAT 420 MIGNYAGLAC GYTTPLQGIQ RYAQTIHRQG CADVACVSDQ QFSAAIDAAR QADATVLVMG 480 LDQSIEAEFR DRTGLLLPGR QQELVSKVAA ASKGPTILVL MSGGPIDVSF AENDPKIGSI 540 VWAGYPGQAG GAAISDVLFG ITNPGGKLPM TWYPQDYITN LPMTNMAMRS SKSKGYPGRT 600 YRFYKGKVVY PFGHGISYTN FVHTIASAPT MVSVPLDGHR HGSGNATISG KAIRVTHARC 660 NRLSLGMQVD VKNTGSMDGT HTLLVYSRPP ARHWAPHKQL VAFEKVHVAA GTQQRVGINI 720 HVCKSLSVVD GSGIRRIPMG EHSLHIGDVK HSVSLQASIL GVVES* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 9.0e-37 | 70 | 451 | 389 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 7.0e-49 | 60 | 330 | 303 | + Glycosyl hydrolase family 3 N terminal domain. | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-55 | 388 | 619 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 4.0e-59 | 7 | 720 | 804 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 1 | 757 | 791 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 4 | 765 | 2 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 4 | 765 | 7 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 3 | 765 | 9 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320310.1 | 0 | 132 | 765 | 2 | 635 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 20 | 765 | 21 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 110 | 720 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u48_A | 0 | 110 | 720 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_B | 0 | 110 | 720 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_A | 0 | 110 | 720 | 91 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2x41_A | 2e-38 | 51 | 759 | 3 | 711 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |