Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G122200.3 |
Family | GH3 |
Protein Properties | Length: 636 Molecular Weight: 68669.5 Isoelectric Point: 8.8382 |
Chromosome | Chromosome/Scaffold: 14 Start: 9457175 End: 9460246 |
Description | beta-xylosidase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 2 | 148 | 0 |
QVVSDEARAMFNGGVAGLTYWSPNVNIFRDPRWGRGQETPGEDPVVVGKYAASYVRGLQGSDGNRLKVAACCKHFTAYDLDNWNGVDRFHFNAEVSKQDM EDTFDVPFRMCVKEGKVASVMCSYNQVNGIPTCADPNLLKKTVRGTL |
Full Sequence |
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Protein Sequence Length: 636 Download |
MQVVSDEARA MFNGGVAGLT YWSPNVNIFR DPRWGRGQET PGEDPVVVGK YAASYVRGLQ 60 GSDGNRLKVA ACCKHFTAYD LDNWNGVDRF HFNAEVSKQD MEDTFDVPFR MCVKEGKVAS 120 VMCSYNQVNG IPTCADPNLL KKTVRGTLFQ TVTLLEFIMG SNTILQPRRK QPRMLLKQAS 180 LDLDCGPFLG QHTEDAVKKG LLNEAEINNA LLNTLTVQMR LGMFDGEPSS QLYGNLGPND 240 VCTPAHQELA LEAARQGIVL LKNHGPSLPL STRRHLSVAI VGPNSNVTAT MIGNYAGLAC 300 GYTTPLQGIQ RYAQTIHRQG CADVACVSDQ QFSAAIDAAR QADATVLVMG LDQSIEAEFR 360 DRTGLLLPGR QQELVSKVAA ASKGPTILVL MSGGPIDVSF AENDPKIGSI VWAGYPGQAG 420 GAAISDVLFG ITNPGGKLPM TWYPQDYITN LPMTNMAMRS SKSKGYPGRT YRFYKGKVVY 480 PFGHGISYTN FVHTIASAPT MVSVPLDGHR HGSGNATISG KAIRVTHARC NRLSLGMQVD 540 VKNTGSMDGT HTLLVYSRPP ARHWAPHKQL VAFEKVHVAA GTQQRVGINI HVCKSLSVVD 600 GSGIRRIPMG EHSLHIGDVK HSVSLQASIL GVVES* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 6.0e-29 | 22 | 321 | 307 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 4.0e-38 | 7 | 200 | 200 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 2.0e-55 | 22 | 590 | 622 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-56 | 258 | 489 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 0 | 4 | 627 | 654 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAG10624.1 | 0 | 2 | 635 | 130 | 763 | AC022521_2 Similar to xylosidase [Arabidopsis thaliana] |
RefSeq | NP_563659.1 | 0 | 2 | 635 | 135 | 768 | BXL2 (BETA-XYLOSIDASE 2); hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] |
RefSeq | XP_002270249.1 | 0 | 2 | 635 | 134 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002320310.1 | 0 | 1 | 635 | 1 | 635 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515300.1 | 0 | 2 | 635 | 133 | 768 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 1 | 590 | 105 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u48_A | 0 | 1 | 590 | 105 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_B | 0 | 1 | 590 | 105 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3u4a_A | 0 | 1 | 590 | 105 | 696 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2x41_A | 2e-32 | 23 | 629 | 117 | 711 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
(1,4)-β-xylan degradation | 3.2.1.37-RXN | EC-3.2.1.37 | xylan 1,4-β-xylosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY291330 | 351 | 283 | 633 | 0 |
DY269886 | 329 | 217 | 545 | 0 |
FC910516 | 299 | 283 | 581 | 0 |
ES823938 | 312 | 321 | 632 | 0 |
JG068931 | 308 | 181 | 488 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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