Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.014G127000.1 |
Family | CE8 |
Protein Properties | Length: 561 Molecular Weight: 61116.9 Isoelectric Point: 8.1133 |
Chromosome | Chromosome/Scaffold: 14 Start: 9756675 End: 9758813 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CE8 | 247 | 542 | 0 |
VTVSQDGQGNFTTINDAVAAAPNNTDGSNGYFMIYVTAGIYEEYVSIAKNKKYLMMVGDGINQTVITGNRSVVDGWTTFNSATFAVVAPNFVAVNITFRN TAGAVKHQAVAVRSGADLSAFYGCSFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCN IKAADDLASSNATVQTYLGRPWKQYSRTVYMQSFMDGLINPAGWQIWSGDFALNTSYYAEYNNTGPGSATTNRVTWPGFHVINATDAVNFTVSSFL |
Full Sequence |
---|
Protein Sequence Length: 561 Download |
MTPSKLISLV ALAVVFLPFL ASPSLADVPS SDPVSPGTLC KDTPDPSFCK SVLPVQSTNV 60 YDSARLCVRK SLSQSRKFLN LVNEYLSRRS TLSVAAIRAL EDCQFLANLN MEFLLSSFQT 120 VNATSKTLPS LQADNVQTLL SAILTNQQTC LDGLQATSSA SSVSNDLSVP LSNDTKLYSV 180 SLAFFTEGWV PKKKRGSTWQ PKSKQFAFRH GRLPMKMSAR TRAIYESVST RKLLQTVNND 240 IEVSDIVTVS QDGQGNFTTI NDAVAAAPNN TDGSNGYFMI YVTAGIYEEY VSIAKNKKYL 300 MMVGDGINQT VITGNRSVVD GWTTFNSATF AVVAPNFVAV NITFRNTAGA VKHQAVAVRS 360 GADLSAFYGC SFEGYQDTLY THSLRQFYRE CDIYGTVDFI FGNAAVVLQN CNLYPRLPMS 420 GQFNAITAQG RTDPNQNTGT SIHNCNIKAA DDLASSNATV QTYLGRPWKQ YSRTVYMQSF 480 MDGLINPAGW QIWSGDFALN TSYYAEYNNT GPGSATTNRV TWPGFHVINA TDAVNFTVSS 540 FLLGNDWLPQ TAVPFSSGLI * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02468 | PLN02468 | 1.0e-145 | 95 | 559 | 465 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 3.0e-151 | 23 | 559 | 546 | + pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 0 | 2 | 560 | 565 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN03043 | PLN03043 | 0 | 35 | 560 | 548 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
pfam01095 | Pectinesterase | 0 | 247 | 545 | 300 | + Pectinesterase. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF42040.1 | 0 | 4 | 560 | 3 | 564 | pectin methylesterase 3 [Pyrus communis] |
RefSeq | XP_002268492.1 | 0 | 38 | 559 | 34 | 555 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002302726.1 | 0 | 4 | 560 | 3 | 558 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320332.1 | 0 | 1 | 560 | 1 | 560 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002523112.1 | 0 | 18 | 560 | 22 | 566 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 247 | 559 | 9 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 249 | 559 | 7 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 4e-23 | 250 | 549 | 12 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 4e-23 | 250 | 549 | 12 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 1e-22 | 250 | 549 | 12 | 339 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |