| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.014G145400.1 |
| Family | GT29 |
| Protein Properties | Length: 476 Molecular Weight: 53500.1 Isoelectric Point: 8.9174 |
| Chromosome | Chromosome/Scaffold: 14 Start: 11100520 End: 11107580 |
| Description | MALE GAMETOPHYTE DEFECTIVE 2 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT29 | 156 | 350 | 3.19496e-43 |
| CSNRALCEDHLNVILPAKPPFHPRQFHTCAVVGNSGDLLKTEFGAEIDSHDAVIRDNEAPVNEKYAKHVGLKRDFRLVVRGAAANMVKILNGSTDEVLII KSQTHRDFNAMIKLIPNPVYLFQGIVLRRGAKGTGMKTIELALSMCDIVDIYGFTVDPGYTEWTRYFSTPRKGHNPLQGRAYYQLLECLGVIRIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 476 Download |
| MRTLKNKRAS ILQLVCVAAF FSLAVFIIQS SFFTAGDNGS SDLNKYFKKE IQILSDFQSS 60 VKQCVANRGF GLTASIVDHC KLILKFPQGT NSTWYNQQFK KFEPLEYNYD VCDAILLWEQ 120 YRNMTTVLTR EYLDTRPDGW LDYAALRIAQ LGAKNCSNRA LCEDHLNVIL PAKPPFHPRQ 180 FHTCAVVGNS GDLLKTEFGA EIDSHDAVIR DNEAPVNEKY AKHVGLKRDF RLVVRGAAAN 240 MVKILNGSTD EVLIIKSQTH RDFNAMIKLI PNPVYLFQGI VLRRGAKGTG MKTIELALSM 300 CDIVDIYGFT VDPGYTEWTR YFSTPRKGHN PLQGRAYYQL LECLGVIRIH SPMRAQRTQD 360 WSDVPSREMI SRAHAAALRL KRGHVNQAAD SGQFGSCKVW GNVDPDNSGP ISGSSDMSDV 420 RRNSNYSKWE VMPFGSLRKE AQDHYAQMGG VSLYKMDGNR LDDLVCVRHS LKSEA* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00777 | Glyco_transf_29 | 9.0e-47 | 161 | 353 | 236 | + Glycosyltransferase family 29 (sialyltransferase). Members of this family belong to glycosyltransferase family 29. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21279.1 | 0 | 8 | 474 | 16 | 477 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_850940.1 | 0 | 7 | 472 | 8 | 471 | glycosyl transferase family 29 protein / sialyltransferase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002275669.1 | 0 | 8 | 464 | 58 | 508 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| RefSeq | XP_002320429.1 | 0 | 1 | 475 | 1 | 474 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002512844.1 | 0 | 1 | 448 | 1 | 443 | alpha-2,8-sialyltransferase 8b, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wnf_A | 0.00000000002 | 184 | 312 | 100 | 250 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
| PDB | 2wnb_A | 0.00000000002 | 184 | 312 | 100 | 250 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
| PDB | 2wml_A | 0.00000000003 | 184 | 312 | 100 | 250 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
