| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.014G149700.1 |
| Family | CE8 |
| Protein Properties | Length: 581 Molecular Weight: 62765.4 Isoelectric Point: 7.7846 |
| Chromosome | Chromosome/Scaffold: 14 Start: 11473946 End: 11476733 |
| Description | pectin methylesterase 61 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 275 | 563 | 0 |
| AVVARDGSGTHTSIAEAIRQVAASLDGGGRNVIYIKAGTYKENLNIPSKQKDVLLYGDGKGKTVIVGSKNAADGSTTYDSATVGVMGDGFIAKDITFVNS AGPSKHQAVALRVGSDRAVIFRCSIDGYQDTLYTLSKRQFYRETDIYGTVDFIFGNSAVVFQNCNIFARNPGTGQKNFVTAQGRTSPDQNTGISIQNCQI EAQSVTYLGRPWKQYSRTVIMQSSLDGSIDPAGWFPWAGGSSPSSIYYGEYSNSGPGSSTSGRVNWPGYHSSLTSVEAQKFTVGSFISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 581 Download |
| MYTMPKFFHA NPRDKKTSFM AALSILLIIK ILCLATFAEA TTSKPLPSQF AKLSRSTTTP 60 GAPSSTDTSP CKGTPYKAAC QSLLLTLNTN NNADLPKTPK ELFDYSVHFT SSQAHSAIDQ 120 LATTFLGQTY QEIDMTHLPG SGMRDCMELL DDTLDQLSNV INRKNDPTHT HNDVQTWLSA 180 ALTNQETCKE SLLENVKKTH LEKFNVIDSM AKNLSQFISN SLALYVSSYG LPSTSPRGRK 240 LLTDQSNIIN DFPSWVSLSE RKLLEASVGE IEAHAVVARD GSGTHTSIAE AIRQVAASLD 300 GGGRNVIYIK AGTYKENLNI PSKQKDVLLY GDGKGKTVIV GSKNAADGST TYDSATVGVM 360 GDGFIAKDIT FVNSAGPSKH QAVALRVGSD RAVIFRCSID GYQDTLYTLS KRQFYRETDI 420 YGTVDFIFGN SAVVFQNCNI FARNPGTGQK NFVTAQGRTS PDQNTGISIQ NCQIEAQSVT 480 YLGRPWKQYS RTVIMQSSLD GSIDPAGWFP WAGGSSPSSI YYGEYSNSGP GSSTSGRVNW 540 PGYHSSLTSV EAQKFTVGSF ISGNVWLPPT GVAFDSGLGG * |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02468 | PLN02468 | 3.0e-158 | 54 | 578 | 537 | + putative pectinesterase/pectinesterase inhibitor |
| PLN02314 | PLN02314 | 1.0e-161 | 54 | 578 | 546 | + pectinesterase |
| PLN02301 | PLN02301 | 7.0e-172 | 141 | 578 | 451 | + pectinesterase/pectinesterase inhibitor |
| PLN02170 | PLN02170 | 0 | 40 | 578 | 540 | + probable pectinesterase/pectinesterase inhibitor |
| pfam01095 | Pectinesterase | 0 | 274 | 564 | 300 | + Pectinesterase. |
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004857 | enzyme inhibitor activity |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK69695.1 | 0 | 100 | 580 | 48 | 550 | putative pectin methylesterase LuPME1 [Linum usitatissimum] |
| EMBL | CBI39447.1 | 0 | 232 | 578 | 90 | 430 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_181833.1 | 0 | 143 | 578 | 98 | 516 | ATPMEPCRD; enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] |
| RefSeq | NP_191460.1 | 0 | 35 | 578 | 31 | 528 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002527752.1 | 0 | 47 | 580 | 45 | 583 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 274 | 578 | 8 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 0 | 271 | 578 | 1 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 4e-17 | 274 | 568 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 4e-17 | 274 | 568 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 4e-17 | 274 | 568 | 5 | 339 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
