Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G154500.1 |
Family | AA1 |
Protein Properties | Length: 543 Molecular Weight: 60125.6 Isoelectric Point: 6.9985 |
Chromosome | Chromosome/Scaffold: 14 Start: 12004186 End: 12008493 |
Description | SKU5 similar 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 38 | 502 | 0 |
NVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIISVFNSLDEPFLISWNGVQQRRNSWQDGVYGTNCAIPPGQNFTYVLQVKDQIGSYFYFPSLGM HKAAGGFGGFKIASRSVIPVPFSPPSGDFTFLAGDWFKKNHSDLKAILDGGSDLPFPDGLLINGRGSNGYTFTVDPGKTYRFRISNVGLTTSINFRIQGH KMLLVEVEGTHSLQNTYDSLDIHLGQSYSVLVTADQAAHDYFIVVSTRFTSQVLTTTSTLHYSNSAGSVSDTPLGGPTIQIDWSLEQARSLRRNLTASGP RPNPQGSYHYGLINTTRTVRLQNSAPIINGKQRYAVNSVSFISADTPLKLADHYNIPGVFSLGSIPDSPTGGGAYLQTSVMAADFRGYAEIVFENPEDNV QSWHIDGHNFFVVGMDGGQWSPASRLSYNLRDTISRCTVQVYPESWTAVYMPLDNVGMWNVRSEN |
Full Sequence |
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Protein Sequence Length: 543 Download |
MVMAEHYRKN MRYSFMLAVL LLVTCTAGED AYRFHTWNVT YGDIYPLGVK QQGILINGQF 60 PGPQIESVTN DNLIISVFNS LDEPFLISWN GVQQRRNSWQ DGVYGTNCAI PPGQNFTYVL 120 QVKDQIGSYF YFPSLGMHKA AGGFGGFKIA SRSVIPVPFS PPSGDFTFLA GDWFKKNHSD 180 LKAILDGGSD LPFPDGLLIN GRGSNGYTFT VDPGKTYRFR ISNVGLTTSI NFRIQGHKML 240 LVEVEGTHSL QNTYDSLDIH LGQSYSVLVT ADQAAHDYFI VVSTRFTSQV LTTTSTLHYS 300 NSAGSVSDTP LGGPTIQIDW SLEQARSLRR NLTASGPRPN PQGSYHYGLI NTTRTVRLQN 360 SAPIINGKQR YAVNSVSFIS ADTPLKLADH YNIPGVFSLG SIPDSPTGGG AYLQTSVMAA 420 DFRGYAEIVF ENPEDNVQSW HIDGHNFFVV GMDGGQWSPA SRLSYNLRDT ISRCTVQVYP 480 ESWTAVYMPL DNVGMWNVRS ENWARQYLGQ QFYLRVYSPA NSWRDEYPIP TNALLCGRAA 540 GL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02991 | PLN02991 | 0 | 14 | 541 | 528 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 16 | 540 | 528 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 16 | 541 | 526 | + oxidoreductase | ||
PLN02354 | PLN02354 | 0 | 11 | 542 | 545 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 11 | 538 | 544 | + copper ion binding / pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08527.1 | 0 | 11 | 541 | 1 | 538 | Multicopper oxidase, type 1 [Medicago truncatula] |
RefSeq | XP_002269614.1 | 0 | 14 | 541 | 8 | 535 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002301616.1 | 0 | 2 | 541 | 1 | 539 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002320467.1 | 0 | 11 | 542 | 1 | 532 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002524823.1 | 0 | 3 | 541 | 1 | 537 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 33 | 540 | 4 | 542 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 1asq_A | 0 | 33 | 540 | 4 | 542 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 1asp_B | 0 | 33 | 540 | 4 | 542 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 1asp_A | 0 | 33 | 540 | 4 | 542 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 1aso_B | 0 | 33 | 540 | 4 | 542 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |