Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G157600.2 |
Family | GH9 |
Protein Properties | Length: 529 Molecular Weight: 59644.1 Isoelectric Point: 6.6143 |
Chromosome | Chromosome/Scaffold: 14 Start: 12283093 End: 12286963 |
Description | glycosyl hydrolase 9B8 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 44 | 506 | 0 |
DYGDALKKSLLYFESQRSGRLPYNQRVTWRHHSGLTDGLEQGVDLVGGYYDAGDHVKFGLPMAFTVTMLSWTVIEFQHQIAVAGELEHALEAIKWGTDYF IKAHTSPNVLWAEVGDGDTDHYCWQRPEDMTTSRQAYRIDENNPGSDLAGETAAAMAAASIVFKKTNPHYSHLLLHHAQQLFEFGDKYRGKYDENMGVVK SYYASVSGYKDELLWGALWLYKATDNEKYLEYVINNAHCFGGTGWAMEEFSWDVKYAGLQIMAAKLLVEEKHREHGDTLEQYRSKAEHYLCSCLNKNNGT NVNRTPSGLLHIRQWNNMQYVSTAAFLLTVYSDFLLNSNQKLKCHGGSVDHEEILGFAKSQVDYILGSNPMNMSYLVGYGPKYPARVHHRGASIVSYREN KGFIGCTQGYDNWYGREEPNPNVLVGALVGGPDCQDNFTDQRSNYMQTEACTYNTAPLVGVFA |
Full Sequence |
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Protein Sequence Length: 529 Download |
MAMEKKQQHQ CYGAAPKPTF RFAKQWAVLL ISIFPILNTG LAVDYGDALK KSLLYFESQR 60 SGRLPYNQRV TWRHHSGLTD GLEQGVDLVG GYYDAGDHVK FGLPMAFTVT MLSWTVIEFQ 120 HQIAVAGELE HALEAIKWGT DYFIKAHTSP NVLWAEVGDG DTDHYCWQRP EDMTTSRQAY 180 RIDENNPGSD LAGETAAAMA AASIVFKKTN PHYSHLLLHH AQQLFEFGDK YRGKYDENMG 240 VVKSYYASVS GYKDELLWGA LWLYKATDNE KYLEYVINNA HCFGGTGWAM EEFSWDVKYA 300 GLQIMAAKLL VEEKHREHGD TLEQYRSKAE HYLCSCLNKN NGTNVNRTPS GLLHIRQWNN 360 MQYVSTAAFL LTVYSDFLLN SNQKLKCHGG SVDHEEILGF AKSQVDYILG SNPMNMSYLV 420 GYGPKYPARV HHRGASIVSY RENKGFIGCT QGYDNWYGRE EPNPNVLVGA LVGGPDCQDN 480 FTDQRSNYMQ TEACTYNTAP LVGVFAKLLQ MEGQKSHDNH NQPLVASY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02420 | PLN02420 | 0 | 3 | 528 | 537 | + endoglucanase | ||
PLN02171 | PLN02171 | 0 | 44 | 508 | 465 | + endoglucanase | ||
PLN02340 | PLN02340 | 0 | 42 | 523 | 482 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 44 | 506 | 465 | + Glycosyl hydrolase family 9. | ||
PLN00119 | PLN00119 | 0 | 29 | 508 | 480 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI28855.1 | 0 | 3 | 521 | 1 | 491 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_180858.1 | 0 | 28 | 507 | 16 | 503 | AtGH9B8 (Arabidopsis thaliana glycosyl hydrolase 9B8); catalytic/ hydrolase, hydrolyzing O-glycosyl compounds |
RefSeq | XP_002321149.1 | 0 | 3 | 528 | 1 | 526 | glycosyl hydrolase family 9 [Populus trichocarpa] |
RefSeq | XP_002525326.1 | 0 | 17 | 528 | 16 | 527 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002529469.1 | 0 | 37 | 508 | 21 | 492 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 41 | 511 | 1 | 431 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ksc_A | 0 | 41 | 511 | 1 | 431 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 1ks8_A | 0 | 41 | 511 | 1 | 431 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 2xfg_A | 0 | 42 | 514 | 23 | 465 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
PDB | 4tf4_B | 0 | 42 | 513 | 3 | 445 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |