Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G177700.1 |
Family | AA1 |
Protein Properties | Length: 591 Molecular Weight: 65694.4 Isoelectric Point: 5.6757 |
Chromosome | Chromosome/Scaffold: 14 Start: 14588424 End: 14592972 |
Description | SKU5 similar 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 48 | 513 | 0 |
QVIGINRQFPGPILNVTTNWNVVVNVKNDLDEPLLITWNGVQHRKNSWQDGVLGTNCPIPAGWNWTYQFQVKDQIGSFFYFPSLNFQRSAGGYGGVIINN RDVIPLPFAVPDADVVLFISDWYTKSHKKLRKDVENGEDLGVPDGILINGFGPYRYDEALVQGGIAYQIINVEPGSTYRFRVHNVGISTSLNFRIQNHNL LLVETEGSYTVQQNYTNMDIHVGQSYSFLVTMDQTASSDYYIVASPRYVNSSKASGVAILHYANSQGPASGPLPDPPNEYDSFFSMNQARSIRWNVSAGA ARPNPQGSFKYGQITVTDVYVIVNRPAELIDGKWCTTLNGISYLPPSTPLKLAQQYNIPGVYKLDFPNAQMNRPPKVDTSLINGTFKGFMEIIFQNNDTA VQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWDGVARSTTQVFPGAWTAILVSLDNAGIWNLRSEN |
Full Sequence |
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Protein Sequence Length: 591 Download |
MPSIAPCSCT YVVLVLCLVT GSFAGDPYVF FDWTVSYLTA SPLGIKQQVI GINRQFPGPI 60 LNVTTNWNVV VNVKNDLDEP LLITWNGVQH RKNSWQDGVL GTNCPIPAGW NWTYQFQVKD 120 QIGSFFYFPS LNFQRSAGGY GGVIINNRDV IPLPFAVPDA DVVLFISDWY TKSHKKLRKD 180 VENGEDLGVP DGILINGFGP YRYDEALVQG GIAYQIINVE PGSTYRFRVH NVGISTSLNF 240 RIQNHNLLLV ETEGSYTVQQ NYTNMDIHVG QSYSFLVTMD QTASSDYYIV ASPRYVNSSK 300 ASGVAILHYA NSQGPASGPL PDPPNEYDSF FSMNQARSIR WNVSAGAARP NPQGSFKYGQ 360 ITVTDVYVIV NRPAELIDGK WCTTLNGISY LPPSTPLKLA QQYNIPGVYK LDFPNAQMNR 420 PPKVDTSLIN GTFKGFMEII FQNNDTAVQS YHMDGYAFFV VGMDFGVWTE NSRSTYNKWD 480 GVARSTTQVF PGAWTAILVS LDNAGIWNLR SENLDSWYLG QEVYLSIMNP EIDKSEAPLP 540 DNTIYCGILS SLQKDQARRF SFSGAPSLAS PSRTFLVVLI MTLYLRVLLG * 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 2.0e-171 | 24 | 547 | 529 | + oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 24 | 565 | 551 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 24 | 554 | 537 | + copper ion binding / oxidoreductase | ||
PLN02168 | PLN02168 | 0 | 22 | 547 | 537 | + copper ion binding / pectinesterase | ||
PLN02835 | PLN02835 | 0 | 24 | 547 | 526 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA96965.1 | 0 | 6 | 554 | 7 | 544 | pectinesterase-like protein [Arabidopsis thaliana] |
EMBL | CBI35585.1 | 0 | 22 | 583 | 23 | 588 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_199656.1 | 0 | 6 | 554 | 7 | 550 | sks3 (SKU5 Similar 3); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002321241.1 | 0 | 1 | 554 | 1 | 554 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527262.1 | 0 | 1 | 568 | 1 | 570 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 31 | 547 | 6 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asq_A | 0 | 31 | 547 | 6 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asp_B | 0 | 31 | 547 | 6 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asp_A | 0 | 31 | 547 | 6 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1aso_B | 0 | 31 | 547 | 6 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |