y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G177700.2 |
Family | AA1 |
Protein Properties | Length: 416 Molecular Weight: 46500.8 Isoelectric Point: 6.8849 |
Chromosome | Chromosome/Scaffold: 14 Start: 14588424 End: 14592972 |
Description | SKU5 similar 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 37 | 338 | 0 |
IAYQIINVEPGSTYRFRVHNVGISTSLNFRIQNHNLLLVETEGSYTVQQNYTNMDIHVGQSYSFLVTMDQTASSDYYIVASPRYVNSSKASGVAILHYAN SQGPASGPLPDPPNEYDSFFSMNQARSIRWNVSAGAARPNPQGSFKYGQITVTDVYVIVNRPAELIDGKWCTTLNGISYLPPSTPLKLAQQYNIPGVYKL DFPNAQMNRPPKVDTSLINGTFKGFMEIIFQNNDTAVQSYHMDGYAFFVVGMDFGVWTENSRSTYNKWDGVARSTTQVFPGAWTAILVSLDNAGIWNLRS EN |
Full Sequence |
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Protein Sequence Length: 416 Download |
MLFHYHSRYL MQMLSFLLVT GILKVIRYDE ALVQGGIAYQ IINVEPGSTY RFRVHNVGIS 60 TSLNFRIQNH NLLLVETEGS YTVQQNYTNM DIHVGQSYSF LVTMDQTASS DYYIVASPRY 120 VNSSKASGVA ILHYANSQGP ASGPLPDPPN EYDSFFSMNQ ARSIRWNVSA GAARPNPQGS 180 FKYGQITVTD VYVIVNRPAE LIDGKWCTTL NGISYLPPST PLKLAQQYNI PGVYKLDFPN 240 AQMNRPPKVD TSLINGTFKG FMEIIFQNND TAVQSYHMDG YAFFVVGMDF GVWTENSRST 300 YNKWDGVARS TTQVFPGAWT AILVSLDNAG IWNLRSENLD SWYLGQEVYL SIMNPEIDKS 360 EAPLPDNTIY CGILSSLQKD QARRFSFSGA PSLASPSRTF LVVLIMTLYL RVLLG* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 7.0e-102 | 34 | 372 | 343 | + oxidoreductase | ||
PLN02835 | PLN02835 | 5.0e-113 | 24 | 372 | 351 | + oxidoreductase | ||
PLN02168 | PLN02168 | 3.0e-113 | 45 | 372 | 339 | + copper ion binding / pectinesterase | ||
PLN02354 | PLN02354 | 4.0e-121 | 43 | 379 | 343 | + copper ion binding / oxidoreductase | ||
PLN00044 | PLN00044 | 0 | 27 | 390 | 370 | + multi-copper oxidase-related protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI35585.1 | 0 | 27 | 408 | 203 | 588 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002263760.1 | 0 | 33 | 408 | 47 | 427 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002269725.1 | 0 | 27 | 408 | 121 | 506 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
RefSeq | XP_002321241.1 | 0 | 27 | 379 | 202 | 554 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002527262.1 | 0 | 27 | 393 | 202 | 570 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 7e-30 | 41 | 372 | 205 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asq_A | 7e-30 | 41 | 372 | 205 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asp_B | 7e-30 | 41 | 372 | 205 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1asp_A | 7e-30 | 41 | 372 | 205 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
PDB | 1aso_B | 7e-30 | 41 | 372 | 205 | 539 | A Chain A, The Role Of An Inner Loop In The Catalytic Mechanism Of Soybean Beta-Amylase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
JG638488 | 287 | 58 | 344 | 0 |
HO796073 | 360 | 27 | 381 | 0 |
EE592823 | 318 | 39 | 352 | 0 |
HO852795 | 377 | 36 | 406 | 0 |
DT482101 | 228 | 189 | 416 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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