| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.014G178300.1 |
| Family | GT1 |
| Protein Properties | Length: 620 Molecular Weight: 67820.1 Isoelectric Point: 5.6628 |
| Chromosome | Chromosome/Scaffold: 14 Start: 14641036 End: 14649550 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT1 | 192 | 586 | 0 |
| GKRLQDYGHRVRLATHSNFREFVLTAGLEFFPLGGDPKVLAGYMVKNKGFLPSGPSEVSIQRNQIKEIIYSLLPACKDPDIDSKIPFRADAIIANPPAYG HTHVAEALKVPLHIFFTMPWTPTSEFPHPLSRVKQSAGYRLSYQIVDSMIWLGIRDMINDLRKKKLKLRPVTYLSGSQGSDSDVPYGYIWSPHLAPKPKD WGPKIDVVGFCFLDLASNYEPPEPLLKWLEAGQKPIYIGFGSLPVQEPEKMTQTIVEALEQTGQRGIINKGWGGLGNLAEPKDFIYLLDNCPHDWLFLQC KAVVHHGGAGTTAAGLKAACPTTIVPFFGDQPFWGERLHARGVGPPPIPVDEFSLTKLVEAIHFMLDPKVKERAVELAKDMENEDGVDGAVKAFF | |||
| Full Sequence |
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| Protein Sequence Length: 620 Download |
| MAESQQRSSS SSSSSSSSGE ISVRIEGEIS IGVETSGDGN ELESREAVDV ASVSNGISGG 60 GTSNTSMAEK PGVYKSESTP SRLKLERSKT EGQRHQNILA EEAAKIYDDK LPDQEKRILL 120 NRMATVKDNG TVEVVVPGDV EPRTLGVGSD YACNTVADDE PLDATDQYIP PLQIVILIVG 180 TRGDVQPFIA IGKRLQDYGH RVRLATHSNF REFVLTAGLE FFPLGGDPKV LAGYMVKNKG 240 FLPSGPSEVS IQRNQIKEII YSLLPACKDP DIDSKIPFRA DAIIANPPAY GHTHVAEALK 300 VPLHIFFTMP WTPTSEFPHP LSRVKQSAGY RLSYQIVDSM IWLGIRDMIN DLRKKKLKLR 360 PVTYLSGSQG SDSDVPYGYI WSPHLAPKPK DWGPKIDVVG FCFLDLASNY EPPEPLLKWL 420 EAGQKPIYIG FGSLPVQEPE KMTQTIVEAL EQTGQRGIIN KGWGGLGNLA EPKDFIYLLD 480 NCPHDWLFLQ CKAVVHHGGA GTTAAGLKAA CPTTIVPFFG DQPFWGERLH ARGVGPPPIP 540 VDEFSLTKLV EAIHFMLDPK VKERAVELAK DMENEDGVDG AVKAFFKHLP RKKPEPEPES 600 EPSTEPSSIF SFSKCFGCP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG1819 | COG1819 | 7.0e-33 | 174 | 583 | 417 | + Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | ||
| pfam03033 | Glyco_transf_28 | 1.0e-34 | 174 | 318 | 145 | + Glycosyltransferase family 28 N-terminal domain. The glycosyltransferase family 28 includes monogalactosyldiacylglycerol synthase (EC 2.4.1.46) and UDP-N-acetylglucosamine transferase (EC 2.4.1.-). This N-terminal domain contains the acceptor binding site and likely membrane association site. This family also contains a large number of proteins that probably have quite distinct activities. | ||
| cd03784 | GT1_Gtf_like | 2.0e-121 | 174 | 588 | 415 | + This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0008152 | metabolic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030259 | lipid glycosylation |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI37267.1 | 0 | 1 | 618 | 1 | 614 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002265023.1 | 0 | 1 | 618 | 48 | 661 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002301763.1 | 0 | 84 | 593 | 1 | 513 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321244.1 | 0 | 67 | 619 | 1 | 553 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521125.1 | 0 | 1 | 618 | 1 | 625 | transferase, transferring glycosyl groups, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3h4t_A | 5e-32 | 172 | 593 | 1 | 385 | B Chain B, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules |
| PDB | 3h4i_A | 5e-32 | 172 | 593 | 1 | 385 | A Chain A, Chimeric Glycosyltransferase For The Generation Of Novel Natural Products |
| PDB | 1rrv_B | 4e-22 | 172 | 594 | 1 | 404 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1rrv_A | 4e-22 | 172 | 594 | 1 | 404 | A Chain A, X-Ray Crystal Structure Of Tdp-Vancosaminyltransferase Gtfd As A Complex With Tdp And The Natural Substrate, Desvancosaminyl Vancomycin. |
| PDB | 1iir_A | 4e-20 | 416 | 594 | 230 | 403 | A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT046352 | 335 | 181 | 515 | 0 |
| GO883166 | 335 | 134 | 467 | 0 |
| DY295142 | 407 | 78 | 483 | 0 |
| DV466557 | 287 | 291 | 577 | 0 |
| GT046352 | 26 | 508 | 533 | 0.002 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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