Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G182200.1 |
Family | GH17 |
Protein Properties | Length: 329 Molecular Weight: 35781.8 Isoelectric Point: 6.277 |
Chromosome | Chromosome/Scaffold: 14 Start: 15393653 End: 15395181 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 5 | 300 | 0 |
IGINYGQVADKLPPPPSTANLLQSTSIQKVRLYGSDPAIIKALANTGIGIVIGTANGDILGLASDSNFTKSWINKNVLPFYPASNIILITVGNEVMTSND QNLMNKLLPAMQNVQNALNDASLGGKIKVSTVHSMGGLLEFNSANGSPFAINPYPYFAYRSDTRPETLALCLFQPNAGRMDGNTKIKYMNMFDAQVDAVY SALNSMGFKNVEIVVAETGWPFKGDDNDVGPSIENAKAYNGNLIAHLRSMVGTPVMPGKSVDTYLFALYDEELKPGPGSERSFGLFKTDLTVVYDV |
Full Sequence |
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Protein Sequence Length: 329 Download |
SQSFIGINYG QVADKLPPPP STANLLQSTS IQKVRLYGSD PAIIKALANT GIGIVIGTAN 60 GDILGLASDS NFTKSWINKN VLPFYPASNI ILITVGNEVM TSNDQNLMNK LLPAMQNVQN 120 ALNDASLGGK IKVSTVHSMG GLLEFNSANG SPFAINPYPY FAYRSDTRPE TLALCLFQPN 180 AGRMDGNTKI KYMNMFDAQV DAVYSALNSM GFKNVEIVVA ETGWPFKGDD NDVGPSIENA 240 KAYNGNLIAH LRSMVGTPVM PGKSVDTYLF ALYDEELKPG PGSERSFGLF KTDLTVVYDV 300 GLSTNSQKIL IFYPKHYDFW NRLVLYVY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 6.0e-12 | 33 | 293 | 273 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 7.0e-82 | 5 | 300 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002321266.1 | 0 | 1 | 307 | 24 | 352 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321268.1 | 0 | 1 | 307 | 3 | 331 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321274.1 | 0 | 1 | 307 | 24 | 352 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329954.1 | 0 | 1 | 307 | 24 | 352 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329975.1 | 0 | 1 | 307 | 24 | 352 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 5 | 302 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 5 | 300 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 5 | 300 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 5 | 305 | 3 | 317 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 5 | 305 | 3 | 317 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV465941 | 276 | 7 | 260 | 0 |
HO782823 | 319 | 12 | 307 | 0 |
FQ415313 | 299 | 31 | 307 | 0 |
CO125397 | 292 | 21 | 290 | 0 |
JG217900 | 297 | 1 | 275 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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