Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G182700.1 |
Family | GH17 |
Protein Properties | Length: 228 Molecular Weight: 24800.1 Isoelectric Point: 4.3007 |
Chromosome | Chromosome/Scaffold: 14 Start: 15498807 End: 15499625 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 6 | 227 | 0 |
IGIGIVIGTTNGDIPGLASDPNFAKSWINMNVLPFYLASNIILITVGNEVMTSNDQNLMNKLLPAMQNSEPPSSGSFDPSYGDLMKGLLEFNSANGLPFA INPHPYFAYRSDTRLETLAFCLFQPNAGRTDGNTKIKYMNMFDAQVDAVYSALNSMGFKNVEIVVAESGWPYKGDDNEVGPSIEIAKAYNGNLIAHLRSM VGTPLMPGKSEDTYLFALYDED |
Full Sequence |
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Protein Sequence Length: 228 Download |
VRLYGIGIGI VIGTTNGDIP GLASDPNFAK SWINMNVLPF YLASNIILIT VGNEVMTSND 60 QNLMNKLLPA MQNSEPPSSG SFDPSYGDLM KGLLEFNSAN GLPFAINPHP YFAYRSDTRL 120 ETLAFCLFQP NAGRTDGNTK IKYMNMFDAQ VDAVYSALNS MGFKNVEIVV AESGWPYKGD 180 DNEVGPSIEI AKAYNGNLIA HLRSMVGTPL MPGKSEDTYL FALYDED* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 7.0e-6 | 33 | 227 | 202 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 3.0e-47 | 22 | 227 | 233 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002321266.1 | 0 | 1 | 227 | 57 | 321 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321274.1 | 0 | 1 | 227 | 57 | 321 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329954.1 | 0 | 3 | 227 | 70 | 321 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329975.1 | 0 | 1 | 227 | 57 | 321 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332466.1 | 0 | 1 | 227 | 57 | 321 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghs_B | 2e-33 | 7 | 227 | 47 | 280 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 2e-33 | 7 | 227 | 47 | 280 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 2cyg_A | 9e-32 | 8 | 227 | 48 | 287 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 1e-31 | 3 | 227 | 44 | 290 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 1e-31 | 3 | 227 | 44 | 290 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV465941 | 219 | 20 | 211 | 0 |
CO131846 | 235 | 20 | 227 | 0 |
CU543725 | 231 | 24 | 227 | 0 |
CO128767 | 233 | 20 | 225 | 0 |
CO128813 | 233 | 20 | 225 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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