Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G184400.1 |
Family | GH17 |
Protein Properties | Length: 241 Molecular Weight: 25988.6 Isoelectric Point: 6.52 |
Chromosome | Chromosome/Scaffold: 14 Start: 15956242 End: 15957056 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 2 | 232 | 0 |
IIKALANTGIGIVIGTANGDIPGLASDPNFAKSWINTNVLPFYPASNIILITVGNGVMTSNDQNLMNKLLPAMQNVQNALNDASLGGKIKVSTVHTMGVL KQSEPPSSGSFDPSYGDLMKALLEFSRANGSPFAINPYPYFAYRCDTRPETLAFCLFQPNAGRMYGNTKIKYMNMFDAQVDAVYSALNSMGFKNVEIVVA ETGWPFKGDDNDVGPSIENAKAYNGNLIAHL |
Full Sequence |
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Protein Sequence Length: 241 Download |
AIIKALANTG IGIVIGTANG DIPGLASDPN FAKSWINTNV LPFYPASNII LITVGNGVMT 60 SNDQNLMNKL LPAMQNVQNA LNDASLGGKI KVSTVHTMGV LKQSEPPSSG SFDPSYGDLM 120 KALLEFSRAN GSPFAINPYP YFAYRCDTRP ETLAFCLFQP NAGRMYGNTK IKYMNMFDAQ 180 VDAVYSALNS MGFKNVEIVV AETGWPFKGD DNDVGPSIEN AKAYNGNLIA HLRSMVGTFD 240 R |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.002 | 180 | 235 | 57 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 5.0e-64 | 1 | 231 | 231 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002329953.1 | 0 | 1 | 238 | 65 | 302 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329954.1 | 0 | 1 | 238 | 65 | 302 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329956.1 | 0 | 1 | 238 | 65 | 302 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332466.1 | 0 | 1 | 238 | 65 | 302 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332467.1 | 0 | 1 | 238 | 65 | 302 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 5.99756e-43 | 1 | 232 | 38 | 264 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 1e-37 | 3 | 232 | 40 | 258 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 1e-37 | 3 | 232 | 40 | 258 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 1e-36 | 1 | 233 | 39 | 268 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 1e-36 | 1 | 233 | 39 | 268 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV465941 | 238 | 1 | 238 | 0 |
CO128767 | 238 | 1 | 238 | 0 |
CO131846 | 238 | 1 | 238 | 0 |
CO128813 | 238 | 1 | 238 | 0 |
FQ431041 | 237 | 2 | 238 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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