Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.014G184600.1 |
Family | GH17 |
Protein Properties | Length: 355 Molecular Weight: 38226.3 Isoelectric Point: 4.9279 |
Chromosome | Chromosome/Scaffold: 14 Start: 16025792 End: 16026975 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 7 | 325 | 0 |
IGINYGQVADNLPPPSSTAKLLQSTSIQKVRLYGSDPAIIKALANTGIGIVIGTANGDIPGLASDPNFAKSWINTNVLPFYPASNIILITVGNEVMTSND QNLMNKLLPAMQNVQNTLNDESLGGKIKVSTIHSMGVLKQSEPPSSGSFDPSYGDLMKGLLEFNSANGSPFAINPYPYYAYRSDTTPETLAFCLFQPNAG RMDGNTKIKYMNMFDAQVDAVYSALNSMGFKNVEIVVAETGWPYKGDDNKVGPSIDNAKAYNGNLIAHLRSLVGTPLMPGESVDTYLFAFYDEDLIKPGP GSERSSGLFKTGVTMVYDV |
Full Sequence |
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Protein Sequence Length: 355 Download |
ADSQAFIGIN YGQVADNLPP PSSTAKLLQS TSIQKVRLYG SDPAIIKALA NTGIGIVIGT 60 ANGDIPGLAS DPNFAKSWIN TNVLPFYPAS NIILITVGNE VMTSNDQNLM NKLLPAMQNV 120 QNTLNDESLG GKIKVSTIHS MGVLKQSEPP SSGSFDPSYG DLMKGLLEFN SANGSPFAIN 180 PYPYYAYRSD TTPETLAFCL FQPNAGRMDG NTKIKYMNMF DAQVDAVYSA LNSMGFKNVE 240 IVVAETGWPY KGDDNKVGPS IDNAKAYNGN LIAHLRSLVG TPLMPGESVD TYLFAFYDED 300 LIKPGPGSER SSGLFKTGVT MVYDVGLSTS SQVRTKFMCI SLVFRVFNSQ VFYS* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 4.0e-8 | 6 | 315 | 324 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 1.0e-88 | 7 | 325 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002321266.1 | 0 | 1 | 354 | 22 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321268.1 | 0 | 1 | 354 | 1 | 353 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321274.1 | 0 | 1 | 354 | 22 | 374 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002329953.1 | 0 | 2 | 352 | 23 | 372 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332467.1 | 0 | 1 | 354 | 22 | 375 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 7 | 325 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 7 | 325 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 7 | 325 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 7 | 328 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 7 | 328 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV465941 | 276 | 9 | 284 | 0 |
DT751851 | 300 | 1 | 300 | 0 |
HO782823 | 323 | 14 | 335 | 0 |
JG217900 | 297 | 3 | 299 | 0 |
DR918989 | 297 | 1 | 297 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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