Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.015G040800.1 |
Family | AA1 |
Protein Properties | Length: 481 Molecular Weight: 53343.8 Isoelectric Point: 8.9262 |
Chromosome | Chromosome/Scaffold: 15 Start: 3789739 End: 3791639 |
Description | laccase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 10 | 466 | 0 |
IRGGHSYTYKFTVTGQRGTLLWHAHYAWQRASVYGAFIIYPRIPYPFSHPIQAEIPIIFGEWWNGDPDEVEKTMLLTGGGPDSSNAYTINGLPGPLYPCS NQDTFIQTVEYGKTYLLRIINAALTNELFFAIAKHTLTVVEVVAVYTKPFATTSIMISPGQTTTVLMTANKVPDFTGMFVMAARPYLTSVFPSNNSTTIG FLRYKNARTWKGKSPVDPSSLKLHNLPAMEDTAFATKFSDKIKSLASPQYPCNVPKTIDKRVITTISLNLQDCPENKTCSGFKGKSFFASMNNQSFVRPS ISILESYYKNLTKGSFSSGFPEKPPNNFDYTGGDSFTQNMNTKFGTKLLVLPYGTNIEIVLQDTSFLNSENHPIHVHGHNFFIVGSGLGNFNEARDRKRY NLVDPPERNTVAVPSGGWAAIRIKADNPGVWFIHCHLEQHTSWGLATGFIVHNGEGP |
Full Sequence |
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Protein Sequence Length: 481 Download |
MSKNFQCLKI RGGHSYTYKF TVTGQRGTLL WHAHYAWQRA SVYGAFIIYP RIPYPFSHPI 60 QAEIPIIFGE WWNGDPDEVE KTMLLTGGGP DSSNAYTING LPGPLYPCSN QDTFIQTVEY 120 GKTYLLRIIN AALTNELFFA IAKHTLTVVE VVAVYTKPFA TTSIMISPGQ TTTVLMTANK 180 VPDFTGMFVM AARPYLTSVF PSNNSTTIGF LRYKNARTWK GKSPVDPSSL KLHNLPAMED 240 TAFATKFSDK IKSLASPQYP CNVPKTIDKR VITTISLNLQ DCPENKTCSG FKGKSFFASM 300 NNQSFVRPSI SILESYYKNL TKGSFSSGFP EKPPNNFDYT GGDSFTQNMN TKFGTKLLVL 360 PYGTNIEIVL QDTSFLNSEN HPIHVHGHNF FIVGSGLGNF NEARDRKRYN LVDPPERNTV 420 AVPSGGWAAI RIKADNPGVW FIHCHLEQHT SWGLATGFIV HNGEGPSQCL LPPPQDLPSC 480 * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07731 | Cu-oxidase_2 | 1.0e-42 | 329 | 464 | 140 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-48 | 6 | 459 | 480 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 6.0e-56 | 6 | 458 | 486 | + oxidoreductase | ||
TIGR03388 | ascorbase | 6.0e-67 | 6 | 458 | 486 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 6 | 480 | 477 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF78389.1 | 0 | 6 | 480 | 99 | 576 | AC069551_22 T10O22.11 [Arabidopsis thaliana] |
EMBL | CAN74557.1 | 0 | 6 | 480 | 100 | 576 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002281603.1 | 0 | 6 | 480 | 107 | 583 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002317883.1 | 0 | 6 | 480 | 106 | 579 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322091.1 | 0 | 6 | 480 | 106 | 579 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 1.99965e-42 | 6 | 458 | 80 | 521 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1asq_A | 1.99965e-42 | 6 | 458 | 80 | 521 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1asp_B | 1.99965e-42 | 6 | 458 | 80 | 521 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1asp_A | 1.99965e-42 | 6 | 458 | 80 | 521 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
PDB | 1aso_B | 1.99965e-42 | 6 | 458 | 80 | 521 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DN498068 | 240 | 242 | 481 | 0 |
EX134959 | 315 | 174 | 481 | 0 |
HO797675 | 481 | 6 | 481 | 0 |
BU884567 | 209 | 241 | 449 | 0 |
EC925501 | 230 | 252 | 481 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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