Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.015G071400.1 |
Family | GH47 |
Protein Properties | Length: 574 Molecular Weight: 65633.7 Isoelectric Point: 6.433 |
Chromosome | Chromosome/Scaffold: 15 Start: 9599631 End: 9606748 |
Description | Glycosyl hydrolase family 47 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH47 | 43 | 477 | 0 |
MFYHAYENYMTHAFPHDELKPLSRSFTDSLSELGNLKLEHLPQNYNGTALTLIESLSSLVILGNYTEFERAVLWLSENLTFDVDARVNLFECNIRVLGGL VSAHILATDSTNRLVQGSYKNQLLVLAEDLGRRFLPAFDTPTGLPYAWINLKYGVMKNETTETSTSGCGSLILEMGALSRLTGDPRYESAALRALRKLWS MRSSLNLLGTTLDVETGEWIEHSSGIGAGVDSFYEYLFKAHILFGKEDFWRMFHSAYLAVQKYFRHGPWYHEADMRTGKATYWQLTSLQAFWPGLQVLVG DIAAANSSHREFVHVWKKFGVLPERYLLDHQMLHPTEKYYPLRPELAESTFYLYQATKDPWYIEVGETIVNSLNSYTKVEGGFASIRDVTTMQTEDHMHS FFLAETCKYLYLLFDDSFLVDRNYIFTTEGHPLPV |
Full Sequence |
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Protein Sequence Length: 574 Download |
MLACRFRTWV LLLLVIFPSL FDPSFSHFDS AKKKQMREKV RKMFYHAYEN YMTHAFPHDE 60 LKPLSRSFTD SLSELGNLKL EHLPQNYNGT ALTLIESLSS LVILGNYTEF ERAVLWLSEN 120 LTFDVDARVN LFECNIRVLG GLVSAHILAT DSTNRLVQGS YKNQLLVLAE DLGRRFLPAF 180 DTPTGLPYAW INLKYGVMKN ETTETSTSGC GSLILEMGAL SRLTGDPRYE SAALRALRKL 240 WSMRSSLNLL GTTLDVETGE WIEHSSGIGA GVDSFYEYLF KAHILFGKED FWRMFHSAYL 300 AVQKYFRHGP WYHEADMRTG KATYWQLTSL QAFWPGLQVL VGDIAAANSS HREFVHVWKK 360 FGVLPERYLL DHQMLHPTEK YYPLRPELAE STFYLYQATK DPWYIEVGET IVNSLNSYTK 420 VEGGFASIRD VTTMQTEDHM HSFFLAETCK YLYLLFDDSF LVDRNYIFTT EGHPLPVLSA 480 WHERLPEIYI PSNWTYVKNE RQTKRSSAMS LQVCPALSLN AGHGEQQVES ACHVPDDQSD 540 HKCFSDEECG VDSTSCRRRS CSMAGYCGLW LVA* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PTZ00470 | PTZ00470 | 1.0e-81 | 18 | 477 | 496 | + glycoside hydrolase family 47 protein; Provisional | ||
pfam01532 | Glyco_hydro_47 | 2.0e-159 | 43 | 477 | 472 | + Glycosyl hydrolase family 47. Members of this family are alpha-mannosidases that catalyze the hydrolysis of the terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide Man(9)(GlcNAc)(2). |
Gene Ontology | |
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GO Term | Description |
GO:0004571 | mannosyl-oligosaccharide 1,2-alpha-mannosidase activity |
GO:0005509 | calcium ion binding |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_564288.1 | 0 | 7 | 570 | 9 | 571 | glycoside hydrolase family 47 protein [Arabidopsis thaliana] |
RefSeq | XP_002280345.1 | 0 | 1 | 571 | 1 | 571 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318019.1 | 0 | 36 | 572 | 1 | 529 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321565.1 | 0 | 1 | 573 | 1 | 567 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002511454.1 | 0 | 9 | 571 | 9 | 573 | Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1nxc_A | 0 | 31 | 478 | 15 | 466 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayr_A | 0 | 34 | 475 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayq_A | 0 | 34 | 475 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayp_A | 0 | 34 | 475 | 11 | 433 | A Chain A, Structure Of Mouse Golgi Alpha-1,2-Mannosidase Ia Reveals The Molecular Basis For Substrate Specificity Among Class I Enzymes (Family 47 Glycosidases) |
PDB | 4ayo_A | 0 | 34 | 475 | 11 | 433 | A Chain A, Structure Of The Gh47 Processing Alpha-1,2-mannosidase From Caulobacter Strain K31 |