y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.015G127200.2 |
Family | AA1 |
Protein Properties | Length: 512 Molecular Weight: 57069.1 Isoelectric Point: 6.5162 |
Chromosome | Chromosome/Scaffold: 15 Start: 13955685 End: 13958831 |
Description | SKU5 similar 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 1 | 434 | 0 |
MTWPGIQMRRNSWQDGVLGTNCPIPPNWDWTYSFQLKDQIGSFFYYPSLNLQRASGGFGPFVINNRAIIQIPFAQPDGDFVLLIGDWYTRNHSALRADLD SGKDLGMPDGVLINGKGPYRYNTTLVPDGLPYETIKVDPGKTYRFRVHNVGTSTSLNFRIQGHNLLLVETEGHYTVQQNFSSFDIHVGQSCSFLVTMDQN ATSDYYIVASARFVNESLWQKVTGVGILQYSNSKGSATGPLPEAPSDIYNQWSAMNQPKAIRQNTTASGARPNPQGSFHYGSINVTDTYILRSLPPSTID GKLRATLNGISFVNPDTPIRLADLNQVKGSYKLDFPSEPLNRPLRRDTSVINATYKGFIEVILQNNDTKMQSFHMNGYSFFVVGMDWGIWSENSRGSYNK WDSISRSTIEVYPGGWTAVLASLDNVGIWNLRVE |
Full Sequence |
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Protein Sequence Length: 512 Download |
MTWPGIQMRR NSWQDGVLGT NCPIPPNWDW TYSFQLKDQI GSFFYYPSLN LQRASGGFGP 60 FVINNRAIIQ IPFAQPDGDF VLLIGDWYTR NHSALRADLD SGKDLGMPDG VLINGKGPYR 120 YNTTLVPDGL PYETIKVDPG KTYRFRVHNV GTSTSLNFRI QGHNLLLVET EGHYTVQQNF 180 SSFDIHVGQS CSFLVTMDQN ATSDYYIVAS ARFVNESLWQ KVTGVGILQY SNSKGSATGP 240 LPEAPSDIYN QWSAMNQPKA IRQNTTASGA RPNPQGSFHY GSINVTDTYI LRSLPPSTID 300 GKLRATLNGI SFVNPDTPIR LADLNQVKGS YKLDFPSEPL NRPLRRDTSV INATYKGFIE 360 VILQNNDTKM QSFHMNGYSF FVVGMDWGIW SENSRGSYNK WDSISRSTIE VYPGGWTAVL 420 ASLDNVGIWN LRVENLDRWY LGQETYMKIT NPEENGETEM APPDNVLFCG ALASKQQDRS 480 HKDSAGSILQ GNPNLFFTVL MAVCAAVLVF S* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02792 | PLN02792 | 2.0e-162 | 1 | 475 | 479 | + oxidoreductase | ||
PLN02835 | PLN02835 | 2.0e-165 | 1 | 470 | 471 | + oxidoreductase | ||
PLN02168 | PLN02168 | 3.0e-172 | 1 | 470 | 480 | + copper ion binding / pectinesterase | ||
PLN00044 | PLN00044 | 0 | 1 | 482 | 484 | + multi-copper oxidase-related protein; Provisional | ||
PLN02354 | PLN02354 | 0 | 1 | 470 | 474 | + copper ion binding / oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAA23065.1 | 0 | 1 | 477 | 83 | 558 | Pollen-specific protein precursor like [Arabidopsis thaliana] |
RefSeq | NP_194254.2 | 0 | 1 | 492 | 83 | 572 | SKS1 (SKU5 SIMILAR 1); copper ion binding / oxidoreductase [Arabidopsis thaliana] |
RefSeq | XP_002318885.1 | 0 | 1 | 511 | 85 | 593 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002321832.1 | 0 | 1 | 511 | 85 | 595 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510943.1 | 0 | 1 | 511 | 82 | 592 | multicopper oxidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 2.8026e-45 | 1 | 474 | 59 | 543 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1asq_A | 2.8026e-45 | 1 | 474 | 59 | 543 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1asp_B | 2.8026e-45 | 1 | 474 | 59 | 543 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1asp_A | 2.8026e-45 | 1 | 474 | 59 | 543 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1aso_B | 2.8026e-45 | 1 | 474 | 59 | 543 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO796073 | 512 | 1 | 512 | 0 |
EE592823 | 320 | 132 | 451 | 0 |
HO852795 | 385 | 129 | 508 | 0 |
ES850955 | 310 | 144 | 453 | 0 |
ES850955 | 57 | 444 | 499 | 0.002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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