Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.015G127800.1 |
Family | CE8 |
Protein Properties | Length: 525 Molecular Weight: 58679.2 Isoelectric Point: 10.6854 |
Chromosome | Chromosome/Scaffold: 15 Start: 13989284 End: 13992130 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 212 | 508 | 0 |
LVVAKDGSGKFRSIQAAINAASKRRYKTRLIIHVKRGVYKENIEVGANNNNIWLVGDGMRNTIITSSRSVGGGYTTYSSATAGIDGLRFVARGITFSNTA GPLKGQAVALRSASDLSVYYRCSFQGYQDTLFVHSQRQFYRECYIYGTIDFIFGNAAVVFQNSIILVRRPLKGQANMITAQGRNDPFQNTGISIHNSQIL PAPDLKPVAGVFETYLGRPWMRYSRTVILQTYIDGFINPAGWSPWLNSDFAQDTLYYGEYKNFGPGSSTRRRVAWKGFHVITSPSVASRFTVRSLIA |
Full Sequence |
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Protein Sequence Length: 525 Download |
MATKVRLLAT LIVFSSIFSL AASKSTKSNI TWWCNQTPHP STCKYFMSHS HHHFALKHRS 60 KFRLMSVQLA LEKALIAQRQ VSQLGQNCEH QHQKVVWADC LKLHSNTILQ LNRTLIGIRK 120 KRLRCTDVDA QTWLSTALTN IQTCRTGSLD LNVSDFTMPA MSRNLSELIS NTLAINGVLL 180 EDNNTAQEFP SWFSRRNRRL LQSASITAMA NLVVAKDGSG KFRSIQAAIN AASKRRYKTR 240 LIIHVKRGVY KENIEVGANN NNIWLVGDGM RNTIITSSRS VGGGYTTYSS ATAGIDGLRF 300 VARGITFSNT AGPLKGQAVA LRSASDLSVY YRCSFQGYQD TLFVHSQRQF YRECYIYGTI 360 DFIFGNAAVV FQNSIILVRR PLKGQANMIT AQGRNDPFQN TGISIHNSQI LPAPDLKPVA 420 GVFETYLGRP WMRYSRTVIL QTYIDGFINP AGWSPWLNSD FAQDTLYYGE YKNFGPGSST 480 RRRVAWKGFH VITSPSVASR FTVRSLIAGQ SWLPATKVPF SSDL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02916 | PLN02916 | 2.0e-151 | 98 | 521 | 442 | + pectinesterase family protein | ||
PLN02468 | PLN02468 | 5.0e-152 | 22 | 524 | 516 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 2.0e-162 | 5 | 524 | 537 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-176 | 211 | 509 | 299 | + Pectinesterase. | ||
PLN02995 | PLN02995 | 0 | 7 | 524 | 531 | + Probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_190324.1 | 0 | 25 | 524 | 79 | 594 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002264861.1 | 0 | 7 | 524 | 7 | 523 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
RefSeq | XP_002318284.1 | 0 | 1 | 524 | 1 | 527 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322402.1 | 0 | 1 | 524 | 1 | 524 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510939.1 | 0 | 26 | 524 | 27 | 526 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 205 | 524 | 2 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 209 | 524 | 2 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 3e-19 | 211 | 482 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 3e-19 | 211 | 482 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 3e-19 | 211 | 482 | 5 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |