Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.015G127900.1 |
Family | GH9 |
Protein Properties | Length: 503 Molecular Weight: 55121.7 Isoelectric Point: 7.3188 |
Chromosome | Chromosome/Scaffold: 15 Start: 13995539 End: 13998950 |
Description | glycosyl hydrolase 9B6 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 26 | 493 | 0 |
DYGDALTKSILFFEGQRSGKLPPTQRMTWRKDSGLQDGFQIGVDLVGGYYDAGDNVKFNFPMAFSTTMLAWSVLDFGNFMGPDLPHALEAIKWATDYFLK ATSIPGFVFVQVGDPYGDHNCWERPEDMDTPRIPYAASKQFPGSEVSAEIAAALAASSMVFRPSNPAYSARLLKRAAMVFEFADANRGSYNDTLGPWVCP FYCDFSGYEDELIWGAAWLYRATKAPNYWSYVVQNISNLEKNVAKHTDRVGYGGGSFAEFGWDTKNAGINILVSKLLLSSKTSDVGPFIPNADKFVCTVL PESPTVYVSYSPGGLLFKPGGSNLQHATALSFLLLAYARYLNQSNREIHCGNVVATPARLIQFARGQVDYILGTNPLKMSYMVGYGSKFPRKIHHRGSSL PSVDQHPASINCQGGTPYFQSNDPNPNLLIGAVVGGPDKGDSYSDSRADFVHTEPTTYINAPLVGLLA |
Full Sequence |
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Protein Sequence Length: 503 Download |
MGVLKRVLVF GVVITMVMVM RVASHDYGDA LTKSILFFEG QRSGKLPPTQ RMTWRKDSGL 60 QDGFQIGVDL VGGYYDAGDN VKFNFPMAFS TTMLAWSVLD FGNFMGPDLP HALEAIKWAT 120 DYFLKATSIP GFVFVQVGDP YGDHNCWERP EDMDTPRIPY AASKQFPGSE VSAEIAAALA 180 ASSMVFRPSN PAYSARLLKR AAMVFEFADA NRGSYNDTLG PWVCPFYCDF SGYEDELIWG 240 AAWLYRATKA PNYWSYVVQN ISNLEKNVAK HTDRVGYGGG SFAEFGWDTK NAGINILVSK 300 LLLSSKTSDV GPFIPNADKF VCTVLPESPT VYVSYSPGGL LFKPGGSNLQ HATALSFLLL 360 AYARYLNQSN REIHCGNVVA TPARLIQFAR GQVDYILGTN PLKMSYMVGY GSKFPRKIHH 420 RGSSLPSVDQ HPASINCQGG TPYFQSNDPN PNLLIGAVVG GPDKGDSYSD SRADFVHTEP 480 TTYINAPLVG LLAYFRSHPP PL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 1.0e-172 | 1 | 493 | 497 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-178 | 26 | 493 | 472 | + Glycosyl hydrolase family 9. | ||
PLN02308 | PLN02308 | 0 | 4 | 501 | 501 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 21 | 495 | 475 | + endoglucanase | ||
PLN03009 | PLN03009 | 0 | 20 | 501 | 485 | + cellulase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI24580.1 | 0 | 17 | 499 | 1 | 468 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264822.1 | 0 | 21 | 499 | 13 | 494 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002321833.1 | 0 | 16 | 502 | 1 | 487 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510937.1 | 0 | 7 | 499 | 11 | 500 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
RefSeq | XP_002510938.1 | 0 | 1 | 501 | 1 | 503 | endo-1,4-beta-glucanase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 24 | 493 | 2 | 426 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ksc_A | 0 | 24 | 493 | 2 | 426 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 1ks8_A | 0 | 24 | 493 | 2 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 26 | 493 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 26 | 493 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |