Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.015G133500.1 |
Family | GH29 |
Protein Properties | Length: 486 Molecular Weight: 54919 Isoelectric Point: 6.3486 |
Chromosome | Chromosome/Scaffold: 15 Start: 14343712 End: 14345472 |
Description | alpha-L-fucosidase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH29 | 28 | 339 | 0 |
TTPPLPILPLPSFSQLKWQERELIVFLHFGVNTFTDSEWGTGHENPAIFNPVGLNANQWVKVAAEAGFSLMILTAKHHDGFCLWPSKYTGHSVESSPWKN GHGDVVQELVNAAKNHGGIDVGLYLSPWDRHDKRYGNDLEYNGYYMAQLQELLNKYGSIREIWFDGAKGSNAPNMSYYFSDWFSMVKELQASINIFSDAG PDVRWVGNENGFAGDSCWSTINRTSLSIGNGSIVDYLNTGDPEGTDWLPAECDVSIRRGWFWHKSESPKKLSMLLDIYYKSVGRNCVLLFNVPPNSTGLV SEDDAQRLREFR |
Full Sequence |
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Protein Sequence Length: 486 Download |
MGKLQCFLFI ITLLQVSKLV ISERDQVTTP PLPILPLPSF SQLKWQEREL IVFLHFGVNT 60 FTDSEWGTGH ENPAIFNPVG LNANQWVKVA AEAGFSLMIL TAKHHDGFCL WPSKYTGHSV 120 ESSPWKNGHG DVVQELVNAA KNHGGIDVGL YLSPWDRHDK RYGNDLEYNG YYMAQLQELL 180 NKYGSIREIW FDGAKGSNAP NMSYYFSDWF SMVKELQASI NIFSDAGPDV RWVGNENGFA 240 GDSCWSTINR TSLSIGNGSI VDYLNTGDPE GTDWLPAECD VSIRRGWFWH KSESPKKLSM 300 LLDIYYKSVG RNCVLLFNVP PNSTGLVSED DAQRLREFRG AIDTIFSTNL ADKCLTKASS 360 QRGDQDSDFG PQNVLDSDHL WTYWAPKDEE FKDNWIEIKC IDELRFNVIR IQEAIGLGQR 420 IKQHEVYVDG KKVAKGTTVG HKRLHRIEEG VVKGRTVRIQ ILKSRAVPLI SSVGLHYDPF 480 WHPDN* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00754 | F5_F8_type_C | 0.0001 | 357 | 473 | 126 | + F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. | ||
pfam01120 | Alpha_L_fucos | 7.0e-29 | 76 | 338 | 283 | + Alpha-L-fucosidase. | ||
smart00812 | Alpha_L_fucos | 8.0e-33 | 45 | 338 | 336 | + Alpha-L-fucosidase. O-Glycosyl hydrolases (EC 3.2.1.-) are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Because the fold of proteins is better conserved than their sequences, some of the families can be grouped in 'clans'. Family 29 encompasses alpha-L-fucosidases, which is a lysosomal enzyme responsible for hydrolyzing the alpha-1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins. Deficiency of alpha-L-fucosidase results in the lysosomal storage disease fucosidosis. | ||
COG3669 | COG3669 | 2.0e-57 | 42 | 475 | 458 | + Alpha-L-fucosidase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004560 | alpha-L-fucosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0007155 | cell adhesion |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002270630.1 | 0 | 41 | 483 | 22 | 462 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002270674.1 | 0 | 27 | 484 | 5 | 462 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002318264.1 | 0 | 1 | 484 | 1 | 483 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002322431.1 | 0 | 1 | 485 | 1 | 485 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002510887.1 | 0 | 1 | 483 | 1 | 483 | alpha-l-fucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3eyp_B | 0 | 33 | 476 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
PDB | 3eyp_A | 0 | 33 | 476 | 5 | 454 | A Chain A, Crystal Structure Of Putative Alpha-L-Fucosidase From Bacteroides Thetaiotaomicron |
PDB | 3mo4_B | 0 | 38 | 471 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
PDB | 3mo4_A | 0 | 38 | 471 | 21 | 473 | A Chain A, The Crystal Structure Of An Alpha-(1-3,4)-Fucosidase From Bifidobacterium Longum Subsp. Infantis Atcc 15697 |
PDB | 3ues_B | 0 | 38 | 471 | 19 | 471 | A Chain A, Crystal Structure Of Alpha-1,34-Fucosidase From Bifidobacterium Longum Subsp. Infantis Complexed With Deoxyfuconojirimycin |