y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G001700.1 |
Family | GT8 |
Protein Properties | Length: 666 Molecular Weight: 76565.8 Isoelectric Point: 8.2147 |
Chromosome | Chromosome/Scaffold: 16 Start: 81152 End: 85886 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 322 | 637 | 0 |
CLPLRLTTEYYNLNSTEQQFPNQEKLDDPSLHHIALFSDNVLAAAVVVNSTITNSKLTYPQHPSKLVFHIVSDRLNYAAMRMWFLVNPPGVATIQVQNIE EFTWLNSSYSPVLKQLGSRSMIDYYFRAARASSDSNLKYRNPKYLSILNHLRFYLPEIFPKLNKVLFLDDDIVVQKDLTGLWSLDLKGNVNGAVETCGEN FHRFDRYLNFSNPHISKNFDPRACGWAYGMNIFDLKEWKRQNITDVYHTWQKLNHDRQLWKLGTLPPGLITFWKRTHPLDRRWHVLGLGYNPNVSQREIE RAAVIHYNGNMKPWLE |
Full Sequence |
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Protein Sequence Length: 666 Download |
MNAVSFSHTS TTKVFSGILT TMRMRNLVMG LLFLTVLSPI LLYTDKLSSS FTPSTSKQED 60 VNAFTLPTDT RHLNVLPQEE SSTVIKEPIG IVYTDHINSS SNTILTEKDS QLPDAREHKY 120 ARVLSATDDE GHSQTDNIIK QIIQTTNQEE EESQSDNGSD QESQQKTQVQ LEQQSAVNSG 180 DDDEKDALLT ETNKQTDQTA MPDARVRQLR DQLIKARVYL SLPATKNNPH FTRELRMRVK 240 EVQRVLVDAT KDSDLPKNAY AKLNAMDQLL EKGKQMQDDC ATMVKKLRAM LHSTEEQLRV 300 HKKQTMFLTQ LTAKTLPKGL HCLPLRLTTE YYNLNSTEQQ FPNQEKLDDP SLHHIALFSD 360 NVLAAAVVVN STITNSKLTY PQHPSKLVFH IVSDRLNYAA MRMWFLVNPP GVATIQVQNI 420 EEFTWLNSSY SPVLKQLGSR SMIDYYFRAA RASSDSNLKY RNPKYLSILN HLRFYLPEIF 480 PKLNKVLFLD DDIVVQKDLT GLWSLDLKGN VNGAVETCGE NFHRFDRYLN FSNPHISKNF 540 DPRACGWAYG MNIFDLKEWK RQNITDVYHT WQKLNHDRQL WKLGTLPPGL ITFWKRTHPL 600 DRRWHVLGLG YNPNVSQREI ERAAVIHYNG NMKPWLEIGI PKYRSNWAKY VDYDHAYLRE 660 CNINP* 720 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 2.0e-178 | 255 | 665 | 416 | + galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 20 | 665 | 648 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 0 | 203 | 664 | 466 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02718 | PLN02718 | 0 | 25 | 663 | 659 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 179 | 663 | 490 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAB11325.1 | 0 | 22 | 665 | 2 | 615 | unnamed protein product [Arabidopsis thaliana] |
RefSeq | NP_568688.1 | 0 | 22 | 665 | 3 | 616 | GAUT4 (Galacturonosyltransferase 4); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] |
RefSeq | XP_002308736.1 | 0 | 22 | 665 | 1 | 648 | glycosyltransferase [Populus trichocarpa] |
RefSeq | XP_002329942.1 | 0 | 1 | 665 | 1 | 665 | glycosyltransferase, CAZy family GT8 [Populus trichocarpa] |
RefSeq | XP_002525229.1 | 0 | 22 | 665 | 3 | 647 | Glycosyltransferase QUASIMODO1, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ga8_A | 0.0001 | 462 | 571 | 75 | 176 | A Chain A, Catalytic Function And Substrate Recognition Of The Pectate Lyase From Thermotoga Maritima |
PDB | 1g9r_A | 0.0001 | 462 | 571 | 75 | 176 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ss9_A | 0.0002 | 462 | 571 | 75 | 176 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |