Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G014800.1 |
Family | GH5 |
Protein Properties | Length: 357 Molecular Weight: 40108.7 Isoelectric Point: 9.0972 |
Chromosome | Chromosome/Scaffold: 16 Start: 814303 End: 816787 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 28 | 341 | 2.7e-26 |
NNTFYVNGWNSYWLMMESVWSSSRSKVSEMLKRGSQMGLTVCRTWAFSDGHGPDALQVSPGVFNERVFKGLDYVIVEARRNRGRLILSLLNNLVAFGGKT QYVKWAKEAGVNVSSSDDSFFPNPAVVKRKNSLSGVRYSEEPAIFAWELMNEPRCSSSSSAPALQAWIAEMAAYIKSLDKRHLVTVGLEGFYGLNTTNKS EVNPGIRAASLGSDFIPNSAISNIDFASVHAYPDRWIPHADLEAKTSYLSHWVDSHISDGDIALRKPVLFKEVGSSRHVDEKGVFDRDVLLKTVYDKIYE SAKKRRAGAFIWQL |
Full Sequence |
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Protein Sequence Length: 357 Download |
MDSQWRDRRL YPFLGILMLL SLLYLNFNNT FYVNGWNSYW LMMESVWSSS RSKVSEMLKR 60 GSQMGLTVCR TWAFSDGHGP DALQVSPGVF NERVFKGLDY VIVEARRNRG RLILSLLNNL 120 VAFGGKTQYV KWAKEAGVNV SSSDDSFFPN PAVVKRKNSL SGVRYSEEPA IFAWELMNEP 180 RCSSSSSAPA LQAWIAEMAA YIKSLDKRHL VTVGLEGFYG LNTTNKSEVN PGIRAASLGS 240 DFIPNSAISN IDFASVHAYP DRWIPHADLE AKTSYLSHWV DSHISDGDIA LRKPVLFKEV 300 GSSRHVDEKG VFDRDVLLKT VYDKIYESAK KRRAGAFIWQ LLVEGVDGYT DKTTIM* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3934 | COG3934 | 7.0e-18 | 58 | 303 | 248 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN77937.1 | 0 | 1 | 356 | 1 | 404 | hypothetical protein [Vitis vinifera] |
EMBL | CBI33116.1 | 0 | 1 | 356 | 1 | 402 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002272403.1 | 0 | 1 | 356 | 1 | 404 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002307872.1 | 0 | 29 | 356 | 23 | 363 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002520563.1 | 0 | 1 | 356 | 1 | 404 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 30 | 351 | 20 | 346 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 9e-35 | 50 | 347 | 41 | 350 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 9e-35 | 50 | 347 | 41 | 350 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 9e-35 | 50 | 347 | 41 | 350 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 9e-35 | 50 | 347 | 41 | 350 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |