| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.016G025500.4 |
| Family | GH51 |
| Protein Properties | Length: 579 Molecular Weight: 63443.3 Isoelectric Point: 5.0439 |
| Chromosome | Chromosome/Scaffold: 16 Start: 1435414 End: 1440935 |
| Description | alpha-L-arabinofuranosidase 1 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH51 | 224 | 543 | 0 |
| KGVIWFDQVSAMPLDTYKGHGFRNELIEMIDDIKPQFVRFPGGCFVEGEWLRNAFRWKESIGPWEERPGHFGDVWMYWTDDGLGYFEFLQLTEDLGARPI WVFNNGISHQDQVDTTAVSPFVQEALDGLEFARGDSNSKWGSVRAAMGHPEPFDLKYVAVGNEDCGKKNYRGNYLKFYNAIRSAYPDIKIISNCDGSSRS LDHPADYYDYHVYTSASSLFSMTRQFDRTSRTGPKAFVSEYAVTGKDAGTGSLLAALAEAGFLIGLEKNSDIVEMASYAPLFVNANDRRWNPDAIVFNSS MHYGTPSYWVQKFFRESSGA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 579 Download |
| MGEKMSSCKA SCSVLLACFI VGLCSVCQCS AAEVDANQTA NLIINGSSTR PIPETLFGIF 60 FEEINHAGAG GIWAELVNNR GFEAGGQNTP SNIAPWSIIG DQSSLIVSTD RSSCFERNKV 120 ALRMDVLCDS TGGNICPAGG VGIYNPGFWG MNIEQGKAYK VVLYVRSLGS INVSVSLTSS 180 DGSQILASAN IVDSDVSNWT KAEVLLEAKG TNPNSRLQLT TSRKGVIWFD QVSAMPLDTY 240 KGHGFRNELI EMIDDIKPQF VRFPGGCFVE GEWLRNAFRW KESIGPWEER PGHFGDVWMY 300 WTDDGLGYFE FLQLTEDLGA RPIWVFNNGI SHQDQVDTTA VSPFVQEALD GLEFARGDSN 360 SKWGSVRAAM GHPEPFDLKY VAVGNEDCGK KNYRGNYLKF YNAIRSAYPD IKIISNCDGS 420 SRSLDHPADY YDYHVYTSAS SLFSMTRQFD RTSRTGPKAF VSEYAVTGKD AGTGSLLAAL 480 AEAGFLIGLE KNSDIVEMAS YAPLFVNAND RRWNPDAIVF NSSMHYGTPS YWVQKFFRES 540 SGATLLDAKL QTNSSTLVAS AITWQNSDGK TYLKIKVC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam06964 | Alpha-L-AF_C | 6.0e-25 | 462 | 575 | 130 | + Alpha-L-arabinofuranosidase C-terminus. This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolysis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| COG3534 | AbfA | 2.0e-30 | 244 | 436 | 215 | + Alpha-L-arabinofuranosidase [Carbohydrate transport and metabolism] | ||
| smart00813 | Alpha-L-AF_C | 2.0e-31 | 462 | 578 | 127 | + Alpha-L-arabinofuranosidase C-terminus. This entry represents the C terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase. This catalyses the hydrolysis of non-reducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0046373 | L-arabinose metabolic process |
| GO:0046556 | alpha-N-arabinofuranosidase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAP97437.1 | 0 | 24 | 577 | 18 | 577 | alpha-L-arabinofuranosidase [Malus x domestica] |
| DDBJ | BAF42035.1 | 0 | 5 | 578 | 1 | 578 | alpha-Arabinosidase1 [Pyrus communis] |
| RefSeq | XP_002307940.1 | 0 | 5 | 578 | 1 | 575 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002322584.1 | 0 | 1 | 577 | 1 | 571 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523672.1 | 0 | 29 | 578 | 29 | 582 | Alpha-N-arabinofuranosidase 1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s2c_L | 1e-20 | 244 | 557 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_K | 1e-20 | 244 | 557 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_J | 1e-20 | 244 | 557 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_I | 1e-20 | 244 | 557 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
| PDB | 3s2c_H | 1e-20 | 244 | 557 | 48 | 373 | A Chain A, Structure Of The Thermostable Gh51 Alpha-L-Arabinofuranosidase From Thermotoga Petrophila Rku-1 |
