Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G061500.1 |
Family | CBM57 |
Protein Properties | Length: 1019 Molecular Weight: 113463 Isoelectric Point: 8.4925 |
Chromosome | Chromosome/Scaffold: 16 Start: 4289920 End: 4303269 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 478 | 653 | 1.6e-29 |
INCGGPQTLAEGNQYDEDNATTNFYSIPGKWAYSCSGDFISTTSNSSDYVKKMTCGVSISEESLYKTARLCPVSLIYYGFCLHKGNYTVELHFAETVYTQ DEDYSSLGTRIFDVYIQGERKLKDFNIKQKANSTNEAWIEKFPVIVDDHPLEIHFFWAGKGSLYNPPALNGPLVSA |
Full Sequence |
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Protein Sequence Length: 1019 Download |
MHIPPALPFL LLLLLLLCQH GSVFSANSPY VSYGALRRNN VPCSRRGATY YACADQNFNC 60 SADGGLPCDE VYALRAVISA LGLPVPQISR SYCSEKSFYY NSISTTCDCD NTTTICHITT 120 IATYGISVSG HVHEWLSKLI YLKEIDFSQN QLRGSIPNLV NLTRLTSLIL GQNHLSGPIP 180 PTLGKLKALE MLDLQKNFLN GAIPPSLGNL MNLATLSLSN NMLSGQIPKE LGTLLNLTSL 240 RLEDNQLSGY LPPELGKLSK LEELYLNSNS LSGGLPGSFA NLRSLVLFRV AGNKLSGRIP 300 PFIAKWTNLT DLYLMGNDFE GELPPEIFNM PGLQSLWISD LNNTGFSFPK FANMTNINYL 360 IMRNCSLRGQ IPKYIGDNWT SLMYLDLSFN NLTGGIPRSM KKLYLNRLGL ASNMLNGPIP 420 SWIRDIYKVD LSYNYNFTNP QNSTKNKNRQ KLNMTEPNRG SILALSNQCK SKHHSLFINC 480 GGPQTLAEGN QYDEDNATTN FYSIPGKWAY SCSGDFISTT SNSSDYVKKM TCGVSISEES 540 LYKTARLCPV SLIYYGFCLH KGNYTVELHF AETVYTQDED YSSLGTRIFD VYIQGERKLK 600 DFNIKQKANS TNEAWIEKFP VIVDDHPLEI HFFWAGKGSL YNPPALNGPL VSAISVTPNF 660 DVHDGKLSAS QIAGITIGCA FLPLLLFLFI WKMGFLGNRE LREKRIEVQK RSFTIQQIID 720 GTKNFSSKME IGRGRFGVVY KAELPYQIKL AVKKISPQSK QQGKDEIKSE IGNLMSLSHE 780 NLLQLLGGYS NKELHLLIYE YMESGSLHQA LFEQKITNSA TELPWRARYD ICLGIAKGLK 840 YLHEEEEKRI KIKIVHGNIN AKNILLDNTH TAKLSDFGLA TIYNEEDPFT AIKARGSRVY 900 MAPEHALGKA ITVKADVYSY GVVVLEIVSG RSNTEYIPNQ EADFLLDTAG RLHQAGRIRD 960 LVDKKLGSRF DNKQALTLLH LAMDCIKLSP TLRPSMSDVV TILSGSKVNA LTPNSEVV* 1020 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
smart00219 | TyrKc | 4.0e-42 | 730 | 1003 | 285 | + Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily. |
smart00221 | STYKc | 3.0e-42 | 730 | 1003 | 285 | + Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
cd00180 | PKc | 2.0e-42 | 731 | 927 | 200 | + Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. |
pfam11721 | Malectin | 1.0e-42 | 474 | 654 | 185 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
pfam07714 | Pkinase_Tyr | 3.0e-44 | 730 | 1003 | 285 | + Protein tyrosine kinase. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002323341.1 | 0 | 241 | 1018 | 54 | 842 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323343.1 | 0 | 1 | 385 | 1 | 385 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323343.1 | 0.0000000001 | 223 | 423 | 128 | 303 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323479.1 | 0 | 170 | 1008 | 7 | 831 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ulz_A | 5.60519e-45 | 709 | 1005 | 16 | 308 | A Chain A, Glu381ser Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenosine |
PDB | 3uim_A | 5.60519e-45 | 709 | 1005 | 16 | 308 | A Chain A, Structural Basis For The Impact Of Phosphorylation On Plant Receptor- Like Kinase Bak1 Activation |
PDB | 3tl8_H | 2.99878e-43 | 709 | 1006 | 24 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_G | 2.99878e-43 | 709 | 1006 | 24 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3tl8_D | 2.99878e-43 | 709 | 1006 | 24 | 317 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |