CAZyme Information

Basic Information
SpeciesPopulus trichocarpa
Cazyme IDPotri.016G075700.1
FamilyGT41
Protein PropertiesLength: 918 Molecular Weight: 102029 Isoelectric Point: 5.9459
ChromosomeChromosome/Scaffold: 16 Start: 5705688 End: 5715832
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
View CDS
External Links
NCBI Taxonomy
Plaza
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GT413648780
  SLSIKPNFSQSLNNLGVVYTVQGKMDAAASMIEKAIMANPTYAEAYNNLGVLYRDAGNISMAISAYEQCLEIDPDSRNAGQNRLLAMNYINEGHDDKLFE
  AHRDWGRRFMRLYPQYTSWDNPKVPDRPLVIGYVSPDYFTHSVSYFIEAPLVYHVYANYKVVVYSAVVKPDAKTNRFKEKVLKRGGIWRDIYGIDEKKVA
  IMVREDKVDILVELTGHTANNKLGMMACRPAPVQVTWIGYPNTTGLPTIDYRITDSFADPPDTKQKHVEELIRLPECFLCYIPSPEAGPVAPTPALSNGF
  ITFGSFNNLAKITPKVLQVWARILCAVPNSRLVVKCKPFCCDSVRQRFLTMLEQLGLEPLHVDLLPLILLNHDHMQAYSLMDISLDTFPYAGTTTTCESL
  YMGVPCVTMAGAVHAHNVGASLLSNVGLGHLVAKNEEEYVQSALQLASDIAALSNLRMSLRDLMSKSPVCDGPNFTLGLETTYRNMWHRYCKGDVPSLRR
  IELLQQQEVPKEVPI
Full Sequence
Protein Sequence     Length: 918     Download
MAWTENDAGS VREKELIEDN GFLKGSQPST GTSGSPVVSS PVQKGFEGKD ALSYANILRS    60
RNKFADALAL YESVLEKDSG IVEAYIGKGI CLQMQNMGRL AFDSFAEAIK LDPQNACALT    120
HCGILYKDEG RLLEAAESYH KALKADLSYK PASECLAIVL TDLGTSLKLS GNTQEGIQKY    180
YEALKVDPHY APAYYNLGVV YSEMMQYDTA LSCYEKAAME RPMYAEAYCN MGVIYKNRGD    240
LESAIACYER CLAVSPNFEI AKNNMAIALT DFGTKVKLEG DISQGVAYYK KALYYNWHYA    300
DAMYNLGVAY GEMLKFEMAI VFYELAFNFN PHCAEACNNL GVIYKDRDNL DKAVECYQAN    360
SDTSLSIKPN FSQSLNNLGV VYTVQGKMDA AASMIEKAIM ANPTYAEAYN NLGVLYRDAG    420
NISMAISAYE QCLEIDPDSR NAGQNRLLAM NYINEGHDDK LFEAHRDWGR RFMRLYPQYT    480
SWDNPKVPDR PLVIGYVSPD YFTHSVSYFI EAPLVYHVYA NYKVVVYSAV VKPDAKTNRF    540
KEKVLKRGGI WRDIYGIDEK KVAIMVREDK VDILVELTGH TANNKLGMMA CRPAPVQVTW    600
IGYPNTTGLP TIDYRITDSF ADPPDTKQKH VEELIRLPEC FLCYIPSPEA GPVAPTPALS    660
NGFITFGSFN NLAKITPKVL QVWARILCAV PNSRLVVKCK PFCCDSVRQR FLTMLEQLGL    720
EPLHVDLLPL ILLNHDHMQA YSLMDISLDT FPYAGTTTTC ESLYMGVPCV TMAGAVHAHN    780
VGASLLSNVG LGHLVAKNEE EYVQSALQLA SDIAALSNLR MSLRDLMSKS PVCDGPNFTL    840
GLETTYRNMW HRYCKGDVPS LRRIELLQQQ EVPKEVPIKN TDSTRITSSR DGPPESIKAN    900
GFSAVSLPKV DHTINLG* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00189TPR4.0e-18335438104+
pfam13844Glyco_transf_412.0e-18492641151+
cd00189TPR4.0e-2015925799+
pfam13844Glyco_transf_413.0e-22664850187+
COG3914Spy4.0e-87317853584+
Gene Ontology
GO TermDescription
GO:0005515protein binding
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
Swiss-ProtO82039019031903SPY_PETHY RecName: Full=Probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY; AltName: Full=PhSPY
RefSeqXP_002281883.1019131906PREDICTED: hypothetical protein [Vitis vinifera]
RefSeqXP_002308458.1019131916predicted protein [Populus trichocarpa]
RefSeqXP_002323412.1019171917predicted protein [Populus trichocarpa]
RefSeqXP_002530535.1019061903o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB4gz6_D1e-372226426386B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB4gz6_D1e-22664859524715B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB4gz6_D3e-181132776169B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB4gz6_D0.00000015519816152B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
PDB4gz6_D0.00025515950158B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
DY2954084004348310
GT0417893413456850
GT0417891091722780.0000000000005
GT0417891252363580.000006
GT0417891112813890.002
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_058_00216.4.161.321Aquca_058_00216.4.161.321Aquca_058_00216.3.387.547Aquca_058_00216.3.387.547Aquca_058_00216.2
Aquca_058_00216.1.601.761Aquca_058_00216.1.601.761Aquca_072_00077.2Aquca_072_00077.3Aquca_072_00077.1
Arabidopsis lyrata896453.457.745896453.457.745478494
Arabidopsis thalianaAT3G04240.1.457.745AT3G04240.1.457.745AT3G11540.1AT3G11540.2
Brachypodium distachyonBradi3g43577.3.610.769Bradi3g43577.3.610.769Bradi3g43577.2Bradi3g43577.1Bradi5g06647.1.621.781
Bradi5g06647.1.621.781Bradi2g58616.1.592.750Bradi2g58616.1.592.750Bradi3g42910.1
Brassica rapaBra040144.586.743Bra040144.586.743Bra001408Bra034832
Carica papayaevm.model.supercontig_51.46.234.522evm.model.supercontig_51.46.234.522
Capsella rubellaCarubv10012900m.457.745Carubv10012900m.457.745Carubv10013012mCarubv10012928m
Chlamydomonas reinhardtiig13482.t1
Citrus clementinaCiclev10018711m.453.741Ciclev10018711m.453.741Ciclev10011210mCiclev10011021m
Citrus sinensisorange1.1g003557m.291.579orange1.1g003557m.291.579orange1.1g002729m.402.690orange1.1g002729m.402.690orange1.1g002431m.402.690
orange1.1g002431m.402.690orange1.1g005626morange1.1g005594morange1.1g004753morange1.1g007075m
orange1.1g002273morange1.1g003891morange1.1g002443morange1.1g002441morange1.1g002438m
orange1.1g006937morange1.1g007634m
Cucumis sativusCucsa.027630.1.563.753Cucsa.027630.1.563.753Cucsa.083560.1
Eucalyptus grandisEucgr.L00641.1.550.718Eucgr.L00641.1.550.718Eucgr.K02568.1
Fragaria vescamrna16720.1-v1.0-hybrid.551.739mrna16720.1-v1.0-hybrid.551.739mrna15637.1-v1.0-hybrid
Glycine maxGlyma10g31190.2Glyma10g31190.1.468.756Glyma10g31190.1.468.756Glyma20g36330.1.468.756Glyma20g36330.1.468.756
Glyma20g36330.2Glyma19g38241.2Glyma19g38241.1Glyma03g35610.3Glyma03g35610.2
Glyma02g36210.4Glyma02g36210.3Glyma10g08710.1
Gossypium raimondiiGorai.011G150500.2.480.766Gorai.011G150500.2.480.766Gorai.011G150500.1.481.772Gorai.011G150500.1.481.772Gorai.011G150500.3
Gorai.013G189100.3.376.564Gorai.013G189100.3.376.564Gorai.013G189100.2.571.758Gorai.013G189100.2.571.758Gorai.013G189100.1.571.758
Gorai.013G189100.1.571.758Gorai.011G150500.5.520.693Gorai.011G150500.5.520.693Gorai.011G150500.4.520.693Gorai.011G150500.4.520.693
Gorai.007G367900.2Gorai.007G367900.1Gorai.002G238200.2Gorai.002G238200.1
Linum usitatissimumLus10003576.450.737Lus10003576.450.737Lus10004779.456.744Lus10004779.456.744Lus10003113.456.744
Lus10003113.456.744Lus10021336Lus10017009
Malus domesticaMDP0000233292.459.747MDP0000233292.459.747MDP0000119499MDP0000212192MDP0000846748
Manihot esculentacassava4.1_001015m.583.740cassava4.1_001015m.583.740cassava4.1_002695m.313.473cassava4.1_002695m.313.473cassava4.1_002691m.313.473
cassava4.1_002691m.313.473cassava4.1_001021m.581.740cassava4.1_001021m.581.740cassava4.1_001222mcassava4.1_001239m
cassava4.1_001390m
Medicago truncatulaMedtr1g079510.2.224.512Medtr1g079510.2.224.512Medtr1g079510.1.466.754Medtr1g079510.1.466.754
Mimulus guttatusmgv1a000777m.468.756mgv1a000777m.468.756mgv1a000982m.534.691mgv1a000982m.534.691mgv1a000971m
Oryza sativaLOC_Os01g68680.1.495.747LOC_Os01g68680.1.495.747LOC_Os02g28830.1.255.415LOC_Os02g28830.1.255.415LOC_Os08g44510.1
Panicum virgatumPavirv00063187m.616.777Pavirv00063187m.616.777Pavirv00007611mPavirv00052192m
Physcomitrella patensPp1s263_4V6.1.478.766Pp1s263_4V6.1.478.766Pp1s177_132V6.1.476.764Pp1s177_132V6.1.476.764Pp1s346_18V6.1
Pp1s456_4V6.1Pp1s150_16V6.1
Phaseolus vulgarisPhvul.007G119800.1.469.757Phvul.007G119800.1.469.757Phvul.001G192300.2Phvul.001G192300.1Phvul.007G153100.2
Phvul.007G153100.1
Picea abiesMA_76964g0020.246.533MA_76964g0020.246.533MA_247226g0010.309.469MA_247226g0010.309.469MA_869746g0010
MA_475186g0010MA_261690g0010
Populus trichocarpaPotri.013G051400.7.84.372Potri.013G051400.7.84.372Potri.013G051400.6.224.512Potri.013G051400.6.224.512Potri.013G051400.5
Potri.013G051400.4.463.751Potri.013G051400.4.463.751Potri.013G051400.3.463.751Potri.013G051400.3.463.751Potri.013G051400.2.463.751
Potri.013G051400.2.463.751Potri.013G051400.1.463.751Potri.013G051400.1.463.751Potri.019G025600.5.224.512Potri.019G025600.5.224.512
Potri.019G025600.2.459.747Potri.019G025600.2.459.747Potri.019G025600.1.459.747Potri.019G025600.1.459.747Potri.019G025600.6.213.376
Potri.019G025600.6.213.376Potri.019G025600.4.417.580Potri.019G025600.4.417.580Potri.019G025600.3.478.641Potri.019G025600.3.478.641
Potri.006G208900.1Potri.016G075700.4Potri.016G075700.3Potri.016G075700.2Potri.006G208900.3
Potri.006G208900.2
Prunus persicappa000862m.459.747ppa000862m.459.747ppa001075m
Ricinus communis29680.m001749.589.74729680.m001749.589.74727556.m00005030032.m00047548742.m000013
Setaria italicaSi016363mSi016197m.619.779Si016197m.619.779Si000265m.480.641Si000265m.480.641
Si013329mSi013225m
Selaginella moellendorffii143846.391.643143846.391.643159012
Sorghum bicolorSb04g019560.1.619.779Sb04g019560.1.619.779Sb07g024110.1
Thellungiella halophilaThhalv10020104mThhalv10020000m.431.719Thhalv10020000m.431.719Thhalv10019996m.457.745Thhalv10019996m.457.745
Thhalv10020052mThhalv10020017m
Vitis viniferaGSVIVT01026359001.593.754GSVIVT01026359001.593.754GSVIVT01033891001
Volvox carteriVocar20006483m
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)