Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G112000.1 |
Family | AA1 |
Protein Properties | Length: 558 Molecular Weight: 60916.3 Isoelectric Point: 9.542 |
Chromosome | Chromosome/Scaffold: 16 Start: 11477122 End: 11480306 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 22 | 543 | 0 |
CRIRHYKFNVVMKNTTRLCSSKPIVTVNGLFPGPTLYAREDDTVLVKVVNRVKYNLSIHWHGIRQLRTGWADGPAYITQCPIQPGQSYVYNFTITGQRGT LLWHAHILWLRATVHGALVVLPKLGVPYPFPAPHKEVVVVLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSTCSSQGGFTLPVQSGKTYMLR LINAALNEELFFKIAGHKLTVVEVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNTGKYLVAASPFMDAPIAVDNMTATATLHYSGALSNSPTTLTIPPPK NATALANQFTNSLRSLNSKTFPAKVPLTVDHSLFFTVGLGINPCPTCKAGNGSRVVASINNVTFVMPTTALLQAHFFNISGVFTTDFPAKPPHVFNYTGT PPTNLQTTSGTKAYRLPYNSTVQLVMQDTGIISPENHPIHLHGFNFFAVGRGVGNYNPKTDPKKFNLVDPVERNTIGVPSGGWVAIRFRADNPGVWFMHC HLEVHTTWGLKMAFLVDNGKGP |
Full Sequence |
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Protein Sequence Length: 558 Download |
MEYSCFRFML LAVCLFPAVV ECRIRHYKFN VVMKNTTRLC SSKPIVTVNG LFPGPTLYAR 60 EDDTVLVKVV NRVKYNLSIH WHGIRQLRTG WADGPAYITQ CPIQPGQSYV YNFTITGQRG 120 TLLWHAHILW LRATVHGALV VLPKLGVPYP FPAPHKEVVV VLAEWWKSDT EAVINEALKS 180 GLAPNVSDAH TINGHPGAVS TCSSQGGFTL PVQSGKTYML RLINAALNEE LFFKIAGHKL 240 TVVEVDATYV KPFKTDTVLI APGQTTNVLV TTNKNTGKYL VAASPFMDAP IAVDNMTATA 300 TLHYSGALSN SPTTLTIPPP KNATALANQF TNSLRSLNSK TFPAKVPLTV DHSLFFTVGL 360 GINPCPTCKA GNGSRVVASI NNVTFVMPTT ALLQAHFFNI SGVFTTDFPA KPPHVFNYTG 420 TPPTNLQTTS GTKAYRLPYN STVQLVMQDT GIISPENHPI HLHGFNFFAV GRGVGNYNPK 480 TDPKKFNLVD PVERNTIGVP SGGWVAIRFR ADNPGVWFMH CHLEVHTTWG LKMAFLVDNG 540 KGPNESLLPP PSDLPKC* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02191 | PLN02191 | 6.0e-70 | 8 | 547 | 585 | + L-ascorbate oxidase |
PLN02604 | PLN02604 | 7.0e-86 | 8 | 535 | 552 | + oxidoreductase |
TIGR03388 | ascorbase | 2.0e-94 | 24 | 535 | 550 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 22 | 557 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002308208.1 | 0 | 1 | 557 | 1 | 560 | laccase 1c [Populus trichocarpa] |
RefSeq | XP_002308209.1 | 0 | 8 | 557 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 1 | 557 | 1 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 1 | 557 | 1 | 557 | laccase 1b [Populus trichocarpa] |
RefSeq | XP_002533894.1 | 0 | 4 | 557 | 3 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 23 | 535 | 2 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asq_A | 0 | 23 | 535 | 2 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 1asp_B | 0 | 23 | 535 | 2 | 521 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |