Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G112100.1 |
Family | AA1 |
Protein Properties | Length: 565 Molecular Weight: 62027.6 Isoelectric Point: 9.9451 |
Chromosome | Chromosome/Scaffold: 16 Start: 11489119 End: 11492080 |
Description | Laccase/Diphenol oxidase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 29 | 550 | 0 |
CRVRHYKFNVVMKNTTRLCSSKPVVTVNGRFPGPTLYAREDDTVLVKVVNHVKYNVSIHWHGIRQLRTGWADGPAYITQCPIQTGQSYVYNFTITGQRGT LLWHAHILWLRATVHGAIVVLPKRGVPYPFPAPHKEFVVVLAEWWKSDTEAVINEALKSGLAPNVSDAHTINGHPGAVSACPSQGGFTLPVESGKTYMLR LINAALNEELFFKIAGHKLTLVEVDATYVKPFKTDTVLIAPGQTTNVLVTTNKNTGKYLVAASPFMDAPIAVDNMTATATLHYSGALSGTPTTLTIPPPK NATAVANQFTNSLRSLNSKRFPAKVPLTVDHNLFFTVGLGINPCPTCKAGNGSRVVASINNVTFVMPTTALLQAHFFNISGVFTTDFPSKPPHVFNYTGT PPTNLQTTSGTKVYRLRYNSTVELVMQDTGIISPENHPIHLHGFNFFGVGRGVGNYNPKTDPKKFNLVDPVERNTIGVPSGGWVAIRFRVDNPGVWFMHC HLEVHTTWGLKMAFLVDNGKGP |
Full Sequence |
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Protein Sequence Length: 565 Download |
MIRKSAKMEY SWFRFMLLAV SLFPALVECR VRHYKFNVVM KNTTRLCSSK PVVTVNGRFP 60 GPTLYAREDD TVLVKVVNHV KYNVSIHWHG IRQLRTGWAD GPAYITQCPI QTGQSYVYNF 120 TITGQRGTLL WHAHILWLRA TVHGAIVVLP KRGVPYPFPA PHKEFVVVLA EWWKSDTEAV 180 INEALKSGLA PNVSDAHTIN GHPGAVSACP SQGGFTLPVE SGKTYMLRLI NAALNEELFF 240 KIAGHKLTLV EVDATYVKPF KTDTVLIAPG QTTNVLVTTN KNTGKYLVAA SPFMDAPIAV 300 DNMTATATLH YSGALSGTPT TLTIPPPKNA TAVANQFTNS LRSLNSKRFP AKVPLTVDHN 360 LFFTVGLGIN PCPTCKAGNG SRVVASINNV TFVMPTTALL QAHFFNISGV FTTDFPSKPP 420 HVFNYTGTPP TNLQTTSGTK VYRLRYNSTV ELVMQDTGII SPENHPIHLH GFNFFGVGRG 480 VGNYNPKTDP KKFNLVDPVE RNTIGVPSGG WVAIRFRVDN PGVWFMHCHL EVHTTWGLKM 540 AFLVDNGKGP NESLLPPPSD LPKC* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02191 | PLN02191 | 9.0e-64 | 12 | 554 | 588 | + L-ascorbate oxidase |
PLN02604 | PLN02604 | 4.0e-81 | 8 | 542 | 560 | + oxidoreductase |
TIGR03388 | ascorbase | 1.0e-88 | 31 | 542 | 549 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 29 | 564 | 539 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002308208.1 | 0 | 8 | 564 | 1 | 560 | laccase 1c [Populus trichocarpa] |
RefSeq | XP_002308209.1 | 0 | 15 | 564 | 1 | 550 | laccase 1d [Populus trichocarpa] |
RefSeq | XP_002322961.1 | 0 | 8 | 564 | 1 | 557 | laccase 1a [Populus trichocarpa] |
RefSeq | XP_002322962.1 | 0 | 8 | 564 | 1 | 557 | laccase 1b [Populus trichocarpa] |
RefSeq | XP_002533894.1 | 0 | 11 | 564 | 3 | 556 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 30 | 542 | 2 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 1asq_A | 0 | 30 | 542 | 2 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |
PDB | 1asp_B | 0 | 30 | 542 | 2 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1 |