Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.016G138600.1 |
Family | GH5 |
Protein Properties | Length: 472 Molecular Weight: 53117.8 Isoelectric Point: 5.6159 |
Chromosome | Chromosome/Scaffold: 16 Start: 14102924 End: 14106065 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH5 | 83 | 417 | 2.1e-34 |
NDQPFYVNGFNTYWLMVFAADQSTRGKVTEVFQKASSVGLSVCRTWAFNDGQWRALQKSPGVYDEDVFKALDFVVSEANKYKIRLILSLANNWDAYGGKA QYVKWGKASGLNLTSDDDFFSHPTLRSYYKAHVKAVLNRVNTITNITYKDDPTIFAWELMNEPRCTSDPSGDKLQSWITDMAVYVKSMDAKHLVEIGLEG FYGPSAPDRAQFNPNSYATQVGTDFIRNHQVLGVDFASVHIYADSWISQTITDSHIQFTKSWMEAHIEDAEKYLGMPVVFAEFGVSSKDPGYNSSFRDTL INTVYKTLLNSTKRGGSGAGSLLWQLFPDGTDYMD |
Full Sequence |
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Protein Sequence Length: 472 Download |
MDTHKRVFGF KIIFLVSVFI LLNESSKCSS SGVMDDEQFK TMVEEVDNHL PSSSSSQGVY 60 ELNDVEEDEW LMVAKKGNQF VINDQPFYVN GFNTYWLMVF AADQSTRGKV TEVFQKASSV 120 GLSVCRTWAF NDGQWRALQK SPGVYDEDVF KALDFVVSEA NKYKIRLILS LANNWDAYGG 180 KAQYVKWGKA SGLNLTSDDD FFSHPTLRSY YKAHVKAVLN RVNTITNITY KDDPTIFAWE 240 LMNEPRCTSD PSGDKLQSWI TDMAVYVKSM DAKHLVEIGL EGFYGPSAPD RAQFNPNSYA 300 TQVGTDFIRN HQVLGVDFAS VHIYADSWIS QTITDSHIQF TKSWMEAHIE DAEKYLGMPV 360 VFAEFGVSSK DPGYNSSFRD TLINTVYKTL LNSTKRGGSG AGSLLWQLFP DGTDYMDDGY 420 AIVLSKSPST TNIISLHSTR VAIVNSMCSW KCKWGCKKRN PLEAFLYHDD L* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00150 | Cellulase | 0.0002 | 142 | 371 | 240 | + Cellulase (glycosyl hydrolase family 5). | ||
COG2730 | BglC | 3.0e-5 | 126 | 424 | 322 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
COG3934 | COG3934 | 5.0e-27 | 113 | 437 | 334 | + Endo-beta-mannanase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI18019.1 | 0 | 1 | 471 | 1 | 471 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002273389.1 | 0 | 62 | 471 | 1 | 410 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309191.1 | 0 | 60 | 471 | 5 | 415 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002323680.1 | 0 | 59 | 471 | 4 | 414 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528703.1 | 0 | 1 | 471 | 1 | 473 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rh9_A | 0 | 72 | 442 | 6 | 370 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzq_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzo_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzn_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |
PDB | 3pzm_A | 0 | 81 | 433 | 21 | 376 | A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato) |