| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.017G040800.6 |
| Family | GH14 |
| Protein Properties | Length: 364 Molecular Weight: 41323.6 Isoelectric Point: 5.6347 |
| Chromosome | Chromosome/Scaffold: 17 Start: 3341365 End: 3343123 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 1 | 282 | 0 |
| MYSDYMKSFRENMADFLEAGQIIDIEVGCGAAGELRYPSYPETQGWVFPGIGEFQCYDKYLKAEFKEAAKNAGHPEWELPDDAGTYNDKPDSTEFFKQNG TYLTEKGKFFLTWYSNKLLMHGDDILDEANKAFVGCKVKLAAKVSGLHWWYKHHSHAAELTAGYYNLKDRDGYRPAARILSRHHAIMNFTCLEMRDSEQS AEAKSGPQELVQQVLSGAWREKIEVAGENALSRYDAEAYNQILLNARPNGVNKWGPPKLRMFGVTYLRLYDELFEENNFNLF | |||
| Full Sequence |
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| Protein Sequence Length: 364 Download |
| MYSDYMKSFR ENMADFLEAG QIIDIEVGCG AAGELRYPSY PETQGWVFPG IGEFQCYDKY 60 LKAEFKEAAK NAGHPEWELP DDAGTYNDKP DSTEFFKQNG TYLTEKGKFF LTWYSNKLLM 120 HGDDILDEAN KAFVGCKVKL AAKVSGLHWW YKHHSHAAEL TAGYYNLKDR DGYRPAARIL 180 SRHHAIMNFT CLEMRDSEQS AEAKSGPQEL VQQVLSGAWR EKIEVAGENA LSRYDAEAYN 240 QILLNARPNG VNKWGPPKLR MFGVTYLRLY DELFEENNFN LFKTFVRKMH ADQDYCPDPS 300 KYGHEIGPLE RSNPPIPVDD IIDATTPMKP FPWNKQTDMP VDGAGQFGLL GGLINGIKSI 360 FFK* 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 1.0e-75 | 1 | 248 | 251 | + beta-amylase | ||
| PLN02905 | PLN02905 | 3.0e-89 | 1 | 292 | 296 | + beta-amylase | ||
| PLN00197 | PLN00197 | 3.0e-97 | 2 | 294 | 297 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 4.0e-112 | 1 | 289 | 292 | + beta-amylase | ||
| PLN02801 | PLN02801 | 0 | 1 | 362 | 362 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK30294.1 | 0 | 1 | 361 | 158 | 513 | AF353207_1 beta-amylase [Castanea crenata] |
| EMBL | CAN70833.1 | 0 | 1 | 361 | 159 | 519 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI28977.1 | 0 | 1 | 361 | 147 | 507 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281003.1 | 0 | 1 | 361 | 159 | 519 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327920.1 | 0 | 1 | 363 | 157 | 519 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1uko_D | 0 | 1 | 343 | 153 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_C | 0 | 1 | 343 | 153 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_B | 0 | 1 | 343 | 153 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1uko_A | 0 | 1 | 343 | 153 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| PDB | 1ukp_D | 0 | 1 | 343 | 153 | 495 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CV281021 | 283 | 80 | 362 | 0 |
| HO777976 | 343 | 1 | 343 | 0 |
| HO803971 | 333 | 1 | 333 | 0 |
| HO782669 | 339 | 1 | 339 | 0 |
| CK095967 | 244 | 121 | 364 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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