Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.017G057900.1 |
Family | GH35 |
Protein Properties | Length: 892 Molecular Weight: 99878.1 Isoelectric Point: 6.6324 |
Chromosome | Chromosome/Scaffold: 17 Start: 5271382 End: 5285055 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 43 | 346 | 0 |
LIIDGRRRILNSAGIHYPRATPEMWPDLIAKSKEGGADVVQTYVFWGGHEPVKGQYYFEGRYDLVKFVKLVGESGLYLHLRIGPYVCAEWNFGGFPVWLR DVPGVVFRTDNAPFKEEMQKFVTKIVDLMREEMLLSWQGGPIIMFQIENEYGNIEHSFGQGGKEYMKWAAGMALALDAGVPWVMCKQTDAPENIIDACNG YYCDGFKPNSPKKPIFWTEDWDGWYTTWGGRLPHRPVEDLAFAVARFFQRGGSFQNYYMYFGGTNFGRTSGGPFYITSYDYDAPIDEYGLLSEPKWGHLK DLHA |
Full Sequence |
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Protein Sequence Length: 892 Download |
MISSSRLKIS FFQFLSFYLI IQFTLISSNF FEPFNVTYDH RALIIDGRRR ILNSAGIHYP 60 RATPEMWPDL IAKSKEGGAD VVQTYVFWGG HEPVKGQYYF EGRYDLVKFV KLVGESGLYL 120 HLRIGPYVCA EWNFGGFPVW LRDVPGVVFR TDNAPFKEEM QKFVTKIVDL MREEMLLSWQ 180 GGPIIMFQIE NEYGNIEHSF GQGGKEYMKW AAGMALALDA GVPWVMCKQT DAPENIIDAC 240 NGYYCDGFKP NSPKKPIFWT EDWDGWYTTW GGRLPHRPVE DLAFAVARFF QRGGSFQNYY 300 MYFGGTNFGR TSGGPFYITS YDYDAPIDEY GLLSEPKWGH LKDLHAAIKL CEPALVAADS 360 AQYIKLGPKQ EAHVYGGSLS IQGMNFSQYG SQSKCSAFLA NIDERQAATV RFLGQSFTLP 420 PWSVSILPDC RNTVFNTAKV AAQTHIKTVE FVLPLSNSSL LPQFIVQNED SPQSTSWLIA 480 KEPITLWSEE NFTVKGILEH LNVTKDESDY LWYFTRIYVS DDDIAFWEKN KVSPAVSIDS 540 MRDVLRVFIN GQLTGSVVGH WVKAVQPVQF QKGYNELVLL SQTVGLQNYG AFLERDGAGF 600 KGQIKLTGFK NGDIDLSNLS WTYQVGLKGE FLKVYSTGDN EKFEWSELAV DATPSTFTWY 660 KTFFDAPSGV DPVALDLGSM GKGQAWVNGH HIGRYWTVVS PKDGCGSCDY RGAYSSGKCR 720 TNCGNPTQTW YHVPRAWLEA SNNLLVVFEE TGGNPFEISV KLRSAKVICA QVSESHYPPL 780 RKWSRADLTG GNISRNDMTP EMHLKCQDGH IMSSIEFASY GTPNGSCQKF SRGNCHASNS 840 SSVVTEACQG KNKCDIAISN AVFGDPCRGV IKTLAVEARC ISSSNIGYSR Y* 900 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 7.0e-5 | 58 | 194 | 152 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 1.0e-22 | 36 | 338 | 341 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam02140 | Gal_Lectin | 8.0e-27 | 804 | 880 | 81 | + Galactose binding lectin domain. | ||
pfam01301 | Glyco_hydro_35 | 1.0e-159 | 42 | 348 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 17 | 880 | 871 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD91079.1 | 0 | 12 | 887 | 11 | 891 | beta-D-galactosidase [Pyrus pyrifolia] |
DDBJ | BAE72075.1 | 0 | 15 | 891 | 14 | 894 | pear beta-galactosidase3 [Pyrus communis] |
RefSeq | XP_002263385.1 | 0 | 11 | 890 | 8 | 881 | PREDICTED: similar to pear beta-galactosidase3 [Vitis vinifera] |
RefSeq | XP_002328900.1 | 0 | 1 | 891 | 1 | 891 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518051.1 | 0 | 26 | 891 | 30 | 897 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 5.99756e-43 | 42 | 344 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.001 | 538 | 752 | 402 | 575 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 4e-39 | 34 | 335 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 4e-39 | 34 | 335 | 9 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |