Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.017G087300.1 |
Family | CE8 |
Protein Properties | Length: 185 Molecular Weight: 20837.6 Isoelectric Point: 7.0684 |
Chromosome | Chromosome/Scaffold: 17 Start: 10491340 End: 10494600 |
Description | pectin methylesterase 31 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 3 | 161 | 1.5e-38 |
VQEAIDGVPLRNTCRTVIRVPPGVYWQPVPEVTSLTWNNTSTKNDHHQASKVIETGTFRCGTVIVEGEGSGQAVAIRVTADWYAFYNCLFIGWQDTLYLH YGKQYLKDCYIEGYVDFIFGNITALLEHCHIQCKSAGLLIAQSIKSSQESTGYVFPSRH |
Full Sequence |
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Protein Sequence Length: 185 Download |
MMVQEAIDGV PLRNTCRTVI RVPPGVYWQP VPEVTSLTWN NTSTKNDHHQ ASKVIETGTF 60 RCGTVIVEGE GSGQAVAIRV TADWYAFYNC LFIGWQDTLY LHYGKQYLKD CYIEGYVDFI 120 FGNITALLEH CHIQCKSAGL LIAQSIKSSQ ESTGYVFPSR HVGWNNLGKA ENKSNATCFQ 180 GYMYF |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02665 | PLN02665 | 1.0e-29 | 3 | 157 | 193 | + pectinesterase family protein | ||
PLN02432 | PLN02432 | 4.0e-30 | 3 | 157 | 172 | + putative pectinesterase | ||
pfam01095 | Pectinesterase | 1.0e-31 | 3 | 177 | 204 | + Pectinesterase. | ||
PLN02682 | PLN02682 | 7.0e-36 | 3 | 157 | 192 | + pectinesterase family protein | ||
PLN02773 | PLN02773 | 2.0e-95 | 3 | 182 | 245 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08265.1 | 0 | 3 | 185 | 19 | 265 | Pectinesterase [Medicago truncatula] |
RefSeq | NP_566842.1 | 0 | 3 | 185 | 20 | 266 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002283941.1 | 0 | 3 | 185 | 19 | 265 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305315.1 | 0 | 3 | 185 | 19 | 265 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002530008.1 | 0 | 3 | 185 | 19 | 265 | Pectinesterase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 5e-22 | 3 | 163 | 22 | 207 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 7e-16 | 3 | 154 | 18 | 194 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_B | 0.00000000007 | 74 | 136 | 129 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntq_A | 0.00000000007 | 74 | 136 | 129 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 2ntp_B | 0.00000000007 | 74 | 136 | 129 | 193 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DT504951 | 142 | 71 | 185 | 0 |
DT504951 | 40 | 32 | 71 | 0 |
DT504951 | 31 | 1 | 31 | 0 |
JG010872 | 185 | 3 | 157 | 0 |
DT554784 | 248 | 3 | 185 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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