Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.018G016600.1 |
Family | GT28 |
Protein Properties | Length: 538 Molecular Weight: 58979.7 Isoelectric Point: 9.0348 |
Chromosome | Chromosome/Scaffold: 18 Start: 1307832 End: 1312056 |
Description | monogalactosyl diacylglycerol synthase 1 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT28 | 354 | 511 | 5.3e-32 |
VLLMGGGEGMGPIEATARALADSLYDENLGEPKGQVLVICGRNKKLTNRLLSIDWKVPVKVEGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILN DYIAGQEVGNVPHVVENGCGKFSKSPKEIAKIVAEWFGSKADELKAMSQNALKLARPD |
Full Sequence |
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Protein Sequence Length: 538 Download |
MHNPSAVTTT QESGSVFELV AQMGGFAFNR AVQSINSNGL SFSRSDFLFF DSLVGLKTRK 60 VNASLSLSSR SGFRSVWSEF NRTIRLHSER IPIGFASVQI GSGDNNGNNN IGSNDGNNTN 120 GLRDDGCGAL LDDGVRLNGV EGGSPKRVLI LMSDTGGGHR ASAEAIKAAF NEEFGDDYQV 180 FITDLWSEHT PWPFNQLPRS YNFLVKHEAL WKMTYYGTAP RVIHQSNFAA TSTFIAREVA 240 KGLMKYQPDI IISVHPLMQH VPLHILRAKG LLQKIVFTTV VTDLSTCHPT WFHKLVTRCY 300 CPSTDVSKRA MKAGLKPSQI KVYGLPVRPS FVKPVRPKGE LRRELGMDED LPAVLLMGGG 360 EGMGPIEATA RALADSLYDE NLGEPKGQVL VICGRNKKLT NRLLSIDWKV PVKVEGFVTK 420 MEECMGACDC IITKAGPGTI AEAMIRGLPI ILNDYIAGQE VGNVPHVVEN GCGKFSKSPK 480 EIAKIVAEWF GSKADELKAM SQNALKLARP DSVFKIVHDL HELVRQRNFV PQYSRAT* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0707 | MurG | 9.0e-27 | 147 | 517 | 385 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
PRK13608 | PRK13608 | 2.0e-31 | 146 | 524 | 389 | + diacylglycerol glucosyltransferase; Provisional | ||
PRK13609 | PRK13609 | 1.0e-41 | 146 | 536 | 398 | + diacylglycerol glucosyltransferase; Provisional | ||
pfam06925 | MGDG_synth | 2.0e-75 | 159 | 327 | 169 | + Monogalactosyldiacylglycerol (MGDG) synthase. This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. | ||
PLN02605 | PLN02605 | 0 | 148 | 527 | 382 | + monogalactosyldiacylglycerol synthase |
Gene Ontology | |
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GO Term | Description |
GO:0005975 | carbohydrate metabolic process |
GO:0009058 | biosynthetic process |
GO:0009247 | glycolipid biosynthetic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030246 | carbohydrate binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN84152.1 | 0 | 10 | 537 | 2 | 520 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002283410.1 | 0 | 8 | 537 | 32 | 552 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309689.1 | 0 | 1 | 537 | 1 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324925.1 | 0 | 1 | 537 | 1 | 537 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515397.1 | 0 | 1 | 536 | 1 | 534 | 1,2-diacylglycerol 3-beta-galactosyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3s2u_A | 0.003 | 410 | 525 | 235 | 356 | A Chain A, Crystal Structure Of The Pseudomonas Aeruginosa Murg:udp-glcnac Substrate Comp |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
glycolipid biosynthesis | 2.4.1.46-RXN | EC-2.4.1.46 | monogalactosyldiacylglycerol synthase |
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis | HYDROHEX-RXN | - | 13(S)-hydroperoxyoctadeca-9,11-dienoate lyase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX267973 | 342 | 175 | 516 | 0 |
GT049228 | 336 | 191 | 526 | 0 |
EX260172 | 300 | 171 | 470 | 0 |
CV530540 | 296 | 142 | 437 | 0 |
HO466477 | 387 | 140 | 526 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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