y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.018G051200.1 |
Family | CE8 |
Protein Properties | Length: 594 Molecular Weight: 65934.5 Isoelectric Point: 9.3625 |
Chromosome | Chromosome/Scaffold: 18 Start: 5283270 End: 5285486 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 283 | 578 | 0 |
NVTVAKDGSGDFKTISEALAAMPAKYEGRYVIFVKQGIYDETVTVTKKMANITIYGDGSQKTIVTGNKNFADGVQTFRTATFAVLGDGFLCKAMGFRNTA GPEKHQAVAIRVQADRAIFLNCRFEGYQDTLYAQTHRQFYRSCVITGTVDFIFGDATAIFQNCLITVRKPLENQQNLITAQGRVDGHETTGIVLQNCRIE PDKDLVPVKTKIRSYLGRPWKEFSRTIIMESTIGDFIHPDGWLPWQGEFGLKTLYYAEYNNKGAGAKTTARIKWPGYHIINNEEAMKFTAEPFYQG |
Full Sequence |
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Protein Sequence Length: 594 Download |
MVFQDFDLLS ERRRLERRQK LRKKIAIAAV SGIAFFVIVG AGVFALVSNH KSSPGNNGGS 60 AVPQPVESAK PISRVSRVIK TVCNATTYQE TCQKTLEKEV EKDPSLAQPK NLLKIAIKAA 120 DEEMKKVLKK ASSFKFDDPR EKAAFEDCLE LVENAKEELK DSVAHVGDDL GKLAKNAPDL 180 NNWLSAVMSY QQTCIDGFPE GKLKSDMEKT FKASKELTSN SLAMVSSLTS FMKSFPFPAA 240 LNRRLLAKED NSPALNKDDL PGWMSNEDRR ILKGASKDKP KPNVTVAKDG SGDFKTISEA 300 LAAMPAKYEG RYVIFVKQGI YDETVTVTKK MANITIYGDG SQKTIVTGNK NFADGVQTFR 360 TATFAVLGDG FLCKAMGFRN TAGPEKHQAV AIRVQADRAI FLNCRFEGYQ DTLYAQTHRQ 420 FYRSCVITGT VDFIFGDATA IFQNCLITVR KPLENQQNLI TAQGRVDGHE TTGIVLQNCR 480 IEPDKDLVPV KTKIRSYLGR PWKEFSRTII MESTIGDFIH PDGWLPWQGE FGLKTLYYAE 540 YNNKGAGAKT TARIKWPGYH IINNEEAMKF TAEPFYQGDW ISATGSPIHL GLF* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02301 | PLN02301 | 2.0e-172 | 77 | 592 | 520 | + pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 7.0e-173 | 25 | 587 | 583 | + pectinesterase | ||
PLN02745 | PLN02745 | 0 | 1 | 593 | 596 | + Putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 0 | 283 | 579 | 298 | + Pectinesterase. | ||
PLN02468 | PLN02468 | 0 | 25 | 592 | 574 | + putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAA89480.1 | 0 | 1 | 592 | 1 | 596 | pectin methylesterase [Salix gilgiana] |
RefSeq | XP_002273499.1 | 0 | 66 | 593 | 69 | 597 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002324181.1 | 0 | 1 | 593 | 1 | 593 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326319.1 | 0 | 1 | 592 | 1 | 597 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516193.1 | 0 | 1 | 593 | 1 | 593 | Pectinesterase-1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 282 | 592 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 283 | 593 | 4 | 316 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 3e-26 | 283 | 548 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 3e-26 | 283 | 548 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 4e-26 | 283 | 548 | 5 | 311 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |