y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.018G062800.1 |
Family | GH35 |
Protein Properties | Length: 843 Molecular Weight: 93726.9 Isoelectric Point: 7.2474 |
Chromosome | Chromosome/Scaffold: 18 Start: 7766617 End: 7770793 |
Description | beta-galactosidase 7 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH35 | 35 | 337 | 0 |
IINGERKIIFAGAIHYPRSTPEMWPELFQKAKEGGIDAIETYIFWDRHEPVRRQYYFSGNQDIVKFCKLAQEAGLHVILRIGPYVCAEWSYGGFPMWLHN IPGIELRTDNEIYKNEMQIFTTKIVDVCKEAKLFAPQGGPIILAQIENEYGNVMGPYGDAGRRYVNWCAQMAVGQNVGVPWIMCQQSNAPQPMINTCNGF YCDQFKPNNPKSPKMWTENWSGWFKLWGGRDPHRTAEDLAFSVARFIQNGGVLNSYYMYHGGTNFGRTAGGPYITTSYDYNAPLDEYGNLNQPKWGHLKQ LHE |
Full Sequence |
---|
Protein Sequence Length: 843 Download |
MKLSGSQIEI LLIASLALLC SSSAITVDYD SNAVIINGER KIIFAGAIHY PRSTPEMWPE 60 LFQKAKEGGI DAIETYIFWD RHEPVRRQYY FSGNQDIVKF CKLAQEAGLH VILRIGPYVC 120 AEWSYGGFPM WLHNIPGIEL RTDNEIYKNE MQIFTTKIVD VCKEAKLFAP QGGPIILAQI 180 ENEYGNVMGP YGDAGRRYVN WCAQMAVGQN VGVPWIMCQQ SNAPQPMINT CNGFYCDQFK 240 PNNPKSPKMW TENWSGWFKL WGGRDPHRTA EDLAFSVARF IQNGGVLNSY YMYHGGTNFG 300 RTAGGPYITT SYDYNAPLDE YGNLNQPKWG HLKQLHEAIK QGERILTNGT VTSKNFWGGV 360 DQTTYTNQGT GERFCFLSNT NMEEANVDLG QDGKYSLPAW SVTILQDCNK EIYNTAKVNT 420 QTSIMVKKLH EEDKPVQLSW TWAPEPMKGV LQGKGRFRAT ELLEQKETTV DTTDYLWYMT 480 SVNLNETTLK KWTNVTLRVG TRGHTLHAYV NKKEIVKGDD YSFLFEKPVT LTSGTNTISL 540 LSATVGLANY GQYYDKKPVG IAEGPVQLVA NGKPFMDLTS YQWSYKIGLS GEAKRYNDPN 600 SPHASKFTAS DNLPTGRAMT WYKTTFASPS GTEPVVVDLL GMGKGHAWVN GKSLGRFWPT 660 QIADAKGCPD TCDYRGSYNG DKCVTNCGNP SQRWYHIPRS YLNKDGQNTL ILFEEVGGNP 720 TNVSFQIVAV ETICGNAYEG STLELSCEGG RTISDIQFAS YGDPEGTCGA FMKGSFYATR 780 SAAVVEKACV GKQSCGILVS GETFGLKKRS DIANRLAVQA VCTGYIDNDL ESLKNKNNNS 840 KQ* 900 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 8.0e-7 | 49 | 203 | 176 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
pfam02140 | Gal_Lectin | 2.0e-13 | 745 | 822 | 85 | + Galactose binding lectin domain. | ||
COG1874 | LacA | 2.0e-19 | 27 | 329 | 363 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 2.0e-156 | 35 | 339 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 26 | 823 | 829 | + beta-galactosidase; Provisional |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI27773.1 | 0 | 11 | 822 | 26 | 835 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002324727.1 | 0 | 57 | 788 | 1 | 745 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326135.1 | 0 | 3 | 823 | 1 | 824 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516237.1 | 0 | 6 | 822 | 2 | 825 | beta-galactosidase, putative [Ricinus communis] |
RefSeq | XP_002516256.1 | 0 | 1 | 822 | 25 | 848 | beta-galactosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 21 | 335 | 2 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 8e-40 | 27 | 345 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 8e-40 | 27 | 345 | 11 | 337 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |