Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.018G084200.1 |
Family | AA5 |
Protein Properties | Length: 599 Molecular Weight: 66541.7 Isoelectric Point: 9.6523 |
Chromosome | Chromosome/Scaffold: 18 Start: 11140814 End: 11143352 |
Description | glyoxal oxidase-related protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA5 | 79 | 598 | 0 |
SWELVSVNSGVSAMHAILLPKVDKVLMYDATIWKKSEIRLPAGHCRLLNKTTGEKDCFCHSVLFDIATTAITPLQLHTDTWCSSGGLSIDGNLVGTGGFQ GGAKTVRYLETCKGCNWREFPTALADRRWYSTQAELPDGGFIVVGGRDAFSYEYIPREGRSNAKSYFFDFLKKTSDKDENNLYPFVHLSTDGNLFIFAND RAVLLNPKSNKVVRELPALPGGHRNYPATGMSVLLPIKLHSKNNRVIPAEVLVCGGSGHRDAYTQASKDIFYTALEDCGRIRITDKKPAWKREVMPSPRV MGDMMILPTGDVLLLNGAQRGCSGWGFAREPNFGPAIYHPKAKLGNRFRELKASTIPRMYHSSSVVLPDGKILVAGSNTNNGYVYNAMFPTELRVEKFLP PYLDPSVIGRRPVIIADKAPNQIGYNNLFKLYIKSKALKVEKKDIQVTMYAPAFTTHGVSMNQRLLDLGLEDVITENAFLGIHAITAVSPPSGRVAPPGY YMLFVVHQGVPSVSSWVQIK |
Full Sequence |
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Protein Sequence Length: 599 Download |
MANVFRSLVI LPLLFVASYA QFWLRPDAYE FFNKKKILGP HELFNNPFGD AQDYLRKKID 60 NDFGTQPLPK SANPSHPRSW ELVSVNSGVS AMHAILLPKV DKVLMYDATI WKKSEIRLPA 120 GHCRLLNKTT GEKDCFCHSV LFDIATTAIT PLQLHTDTWC SSGGLSIDGN LVGTGGFQGG 180 AKTVRYLETC KGCNWREFPT ALADRRWYST QAELPDGGFI VVGGRDAFSY EYIPREGRSN 240 AKSYFFDFLK KTSDKDENNL YPFVHLSTDG NLFIFANDRA VLLNPKSNKV VRELPALPGG 300 HRNYPATGMS VLLPIKLHSK NNRVIPAEVL VCGGSGHRDA YTQASKDIFY TALEDCGRIR 360 ITDKKPAWKR EVMPSPRVMG DMMILPTGDV LLLNGAQRGC SGWGFAREPN FGPAIYHPKA 420 KLGNRFRELK ASTIPRMYHS SSVVLPDGKI LVAGSNTNNG YVYNAMFPTE LRVEKFLPPY 480 LDPSVIGRRP VIIADKAPNQ IGYNNLFKLY IKSKALKVEK KDIQVTMYAP AFTTHGVSMN 540 QRLLDLGLED VITENAFLGI HAITAVSPPS GRVAPPGYYM LFVVHQGVPS VSSWVQIK* 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam09118 | DUF1929 | 7.0e-25 | 489 | 597 | 110 | + Domain of unknown function (DUF1929). Members of this family adopt a secondary structure consisting of a bundle of seven, mostly antiparallel, beta-strands surrounding a hydrophobic core. The 7 strands are arranged in 2 sheets, in a Greek-key topology. Their precise function, has not, as yet, been defined, though they are mostly found in sugar-utilising enzymes, such as galactose oxidase. | ||
cd02851 | E_set_GO_C | 5.0e-27 | 487 | 597 | 112 | + C-terminal Early set domain associated with the catalytic domain of galactose oxidase. E or "early" set domains are associated with the catalytic domain of galactose oxidase at the C-terminal end. Galactose oxidase is an extracellular monomeric enzyme which catalyzes the stereospecific oxidation of a broad range of primary alcohol substrates and possesses a unique mononuclear copper site essential for catalyzing a two-electron transfer reaction during the oxidation of primary alcohols to corresponding aldehydes. The second redox active center necessary for the reaction was found to be situated at a tyrosine residue. The C-terminal domain of galactose oxidase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chitinase, among others. | ||
pfam07250 | Glyoxal_oxid_N | 2.0e-111 | 92 | 334 | 247 | + Glyoxal oxidase N-terminus. This family represents the N-terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyzes the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAL84955.1 | 0 | 80 | 597 | 79 | 593 | AT5g19580/T20D1_100 [Arabidopsis thaliana] |
RefSeq | NP_197459.1 | 0 | 80 | 597 | 79 | 593 | glyoxal oxidase-related [Arabidopsis thaliana] |
RefSeq | XP_002324431.1 | 0 | 79 | 598 | 3 | 522 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002331167.1 | 0 | 1 | 598 | 1 | 609 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514260.1 | 0 | 1 | 598 | 1 | 613 | Galactose oxidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2vz3_A | 0.000000003 | 377 | 597 | 439 | 637 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 2vz1_A | 0.000000003 | 377 | 597 | 439 | 637 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 2jkx_A | 0.000000003 | 377 | 597 | 439 | 637 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
PDB | 2eie_A | 0.000000003 | 377 | 597 | 439 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |
PDB | 1goh_A | 0.000000003 | 377 | 597 | 439 | 637 | A Chain A, Crystal Structure Of Galactose Oxidase Complexed With Azide |