| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.018G097100.1 |
| Family | GH33 |
| Protein Properties | Length: 322 Molecular Weight: 35973.8 Isoelectric Point: 5.6408 |
| Chromosome | Chromosome/Scaffold: 18 Start: 12544731 End: 12548954 |
| Description | BNR/Asp-box repeat family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH33 | 16 | 310 | 6.3e-30 |
| TFPANSSPFNSCHASTIVEVDKNHFLVAYFGGTKEGAPDVKIWIQTYKDGYWQSPIIVDDQLDVPMWNPVLFKLASEELLLFYKVGQEVQKWSGCMKRSY DKGVTWSKREQLPPGILGPSKNKPILLENGLLLCGSSVESWNSWGAWMEVTADAGRSWRKHGPIYVENTSLSVIQPVPFQTADGTFRVLLRSFDDIGRVC MSESYDGGVTWGYAKPTELPNPNSGIDGVKLKDGPVLLAYNTISRGVLKVAVSKDDGDSWHDVVTLEEKLDMEFSYPAVIQASDGSVHITYTYNR | |||
| Full Sequence |
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| Protein Sequence Length: 322 Download |
| MSKDCHNWQL VKEEFTFPAN SSPFNSCHAS TIVEVDKNHF LVAYFGGTKE GAPDVKIWIQ 60 TYKDGYWQSP IIVDDQLDVP MWNPVLFKLA SEELLLFYKV GQEVQKWSGC MKRSYDKGVT 120 WSKREQLPPG ILGPSKNKPI LLENGLLLCG SSVESWNSWG AWMEVTADAG RSWRKHGPIY 180 VENTSLSVIQ PVPFQTADGT FRVLLRSFDD IGRVCMSESY DGGVTWGYAK PTELPNPNSG 240 IDGVKLKDGP VLLAYNTISR GVLKVAVSKD DGDSWHDVVT LEEKLDMEFS YPAVIQASDG 300 SVHITYTYNR TQIKHVVLQP S* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG4692 | COG4692 | 1.0e-29 | 22 | 320 | 354 | + Predicted neuraminidase (sialidase) [Carbohydrate transport and metabolism] | ||
| pfam13088 | BNR_2 | 2.0e-94 | 39 | 304 | 281 | + BNR repeat-like domain. This family of proteins contains BNR-like repeats suggesting these proteins may act as sialidases. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU18568.1 | 0 | 1 | 321 | 34 | 354 | unknown [Glycine max] |
| RefSeq | NP_001059779.1 | 0 | 7 | 321 | 105 | 419 | Os07g0516000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002263578.1 | 0 | 11 | 319 | 59 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002324495.1 | 0 | 1 | 321 | 1 | 321 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002531744.1 | 0 | 1 | 321 | 1 | 321 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CV274814 | 246 | 75 | 320 | 0 |
| DV137355 | 268 | 40 | 307 | 0 |
| EL689016 | 287 | 19 | 305 | 0 |
| DV145816 | 255 | 37 | 291 | 0 |
| EY114510 | 260 | 8 | 267 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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