Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.018G129500.3 |
Family | GH17 |
Protein Properties | Length: 370 Molecular Weight: 40757.7 Isoelectric Point: 6.516 |
Chromosome | Chromosome/Scaffold: 18 Start: 15113521 End: 15116714 |
Description | Glycosyl hydrolase superfamily protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH17 | 33 | 351 | 0 |
GINYGRIADNIPSPDEVATLLRAAKIKNVRIYDADHSVLKAFSGTGLQLVVGLPNGFVKEMSANASHAMAWVKENVQAFLPKTSVCGIAVGNEILGGGDY ELWEALLGAVKNIYNAVDKLGLADVVQISTAHSQAVFDNSYPPSSCIFRENVAQFMKPLLEFFSQIGSPFCLNAYPFLAYMSDPENIDINYALFQKTKGI YDMKTDLHYDNMLDAQIDATYAALEDAGFKKMEVIVTETGWASLGDTNEAAATVNNARTFNYNLRKRLAKKKGTPLRPKMVVKAYIFAIFNENLKSGPTS ERNFGLFKPDGSISYDIGF |
Full Sequence |
---|
Protein Sequence Length: 370 Download |
MKSHHHQLLF MFLVFFAQKI ELLTAETFTG TYGINYGRIA DNIPSPDEVA TLLRAAKIKN 60 VRIYDADHSV LKAFSGTGLQ LVVGLPNGFV KEMSANASHA MAWVKENVQA FLPKTSVCGI 120 AVGNEILGGG DYELWEALLG AVKNIYNAVD KLGLADVVQI STAHSQAVFD NSYPPSSCIF 180 RENVAQFMKP LLEFFSQIGS PFCLNAYPFL AYMSDPENID INYALFQKTK GIYDMKTDLH 240 YDNMLDAQID ATYAALEDAG FKKMEVIVTE TGWASLGDTN EAAATVNNAR TFNYNLRKRL 300 AKKKGTPLRP KMVVKAYIFA IFNENLKSGP TSERNFGLFK PDGSISYDIG FHGLSSAESS 360 LLSLKDFLL* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.003 | 30 | 342 | 328 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam00332 | Glyco_hydro_17 | 2.0e-97 | 33 | 351 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM67102.1 | 0 | 28 | 363 | 29 | 365 | putative beta-1,3-glucanase [Arabidopsis thaliana] |
GenBank | AAY25165.1 | 0 | 26 | 365 | 27 | 368 | beta-1,3-glucanase 1 [Ziziphus jujuba] |
RefSeq | XP_002282272.1 | 0 | 1 | 365 | 1 | 366 | PREDICTED: similar to beta-1,3-glucanase 1 [Vitis vinifera] |
RefSeq | XP_002308978.1 | 0 | 24 | 359 | 1 | 336 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325214.1 | 0 | 22 | 365 | 7 | 350 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_C | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_B | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3f55_A | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3em5_D | 0 | 33 | 351 | 3 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |