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Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.019G010800.1 |
Family | GH1 |
Protein Properties | Length: 514 Molecular Weight: 58861.7 Isoelectric Point: 6.4672 |
Chromosome | Chromosome/Scaffold: 19 Start: 1314644 End: 1317810 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 10 | 485 | 0 |
YSFPDDFVFGTSSSAYQYEGETNKHGRGPAIWDTFTEEHTGRIKDHSNGNVAVDFYHRYKEDVQRMKEMGMDAFRFSISWSRVLPHGRLSAGVNEEGIKF YNDFIDDLLKNGLQPYVTLFHWDTPQALEDKYGGFLSPSIVNDFRDFVDLCFQNFGDRVKKWITLNEPWMFSVQGYDMGTMAPGRISVVVNDPHRSLNTG ATEVYTVSHHLLLAHAAAVKLYKEKYQSCQGGQIGITLVSHWFEPYSNSEADQNATKRSLDFMLGWFMDPLTNGDYPRNMHDFVGGRLPEFTAEESKMLK GSYDFIGINYYTTYYAQNIDANYQSVGFMSDARANWTGERNGIPIGPQAGVKWLYIYPEGISSLLNYTKDLYGSPTIYITENGVDDVNNNASSLNEALND PIREKSYKDHLKNVLRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYHVDYKNDLKRYPKQSVKWFKQFLRRD |
Full Sequence |
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Protein Sequence Length: 514 Download |
MGSIDDFSRY SFPDDFVFGT SSSAYQYEGE TNKHGRGPAI WDTFTEEHTG RIKDHSNGNV 60 AVDFYHRYKE DVQRMKEMGM DAFRFSISWS RVLPHGRLSA GVNEEGIKFY NDFIDDLLKN 120 GLQPYVTLFH WDTPQALEDK YGGFLSPSIV NDFRDFVDLC FQNFGDRVKK WITLNEPWMF 180 SVQGYDMGTM APGRISVVVN DPHRSLNTGA TEVYTVSHHL LLAHAAAVKL YKEKYQSCQG 240 GQIGITLVSH WFEPYSNSEA DQNATKRSLD FMLGWFMDPL TNGDYPRNMH DFVGGRLPEF 300 TAEESKMLKG SYDFIGINYY TTYYAQNIDA NYQSVGFMSD ARANWTGERN GIPIGPQAGV 360 KWLYIYPEGI SSLLNYTKDL YGSPTIYITE NGVDDVNNNA SSLNEALNDP IREKSYKDHL 420 KNVLRSINEH GVDVKGFFAW SLMDNFEWGS GYAVRFGLYH VDYKNDLKRY PKQSVKWFKQ 480 FLRRDSHSPL ITSNKTSKIE HSLVRDAKRP RNA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 4.0e-123 | 4 | 482 | 488 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 7.0e-125 | 5 | 486 | 488 | + beta-glucosidase | ||
COG2723 | BglB | 4.0e-130 | 9 | 480 | 488 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 4.0e-151 | 13 | 478 | 470 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 7.0e-170 | 11 | 484 | 478 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330982.1 | 0 | 1 | 513 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330983.1 | 0 | 8 | 482 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 1 | 513 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332805.1 | 0 | 8 | 482 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332916.1 | 0 | 98 | 486 | 1 | 389 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 8 | 484 | 30 | 505 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3ptq_A | 0 | 8 | 484 | 30 | 505 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3ptm_B | 0 | 8 | 484 | 30 | 505 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3ptm_A | 0 | 8 | 484 | 30 | 505 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3ptk_B | 0 | 8 | 484 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794849 | 469 | 4 | 472 | 0 |
DT501012 | 238 | 1 | 238 | 0 |
HO779715 | 447 | 26 | 472 | 0 |
EE590590 | 482 | 7 | 487 | 0 |
FG227815 | 480 | 6 | 483 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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