Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.019G037400.1 |
Family | GH3 |
Protein Properties | Length: 627 Molecular Weight: 67914 Isoelectric Point: 7.8327 |
Chromosome | Chromosome/Scaffold: 19 Start: 4205933 End: 4210954 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 103 | 338 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRDPNLVKRIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKLVQAMTEIVSGLQ GDIPANSSKGVPFVAGKTKVAACAKHYVGDGGTTKGINENNTQISRHGLLSIHMPGYYNSIIKGVSTVMVSYSSWNGVKMHANRDMVTGFLKNILRFKGF VISDWEGIDRITSPPHANYSYSIQAGISAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 627 Download |
MARIPIFLMG LVVIWAALAE AEYMIYKDAT KPLNSRIKDL MSRMTLEEKI GQMTQIERGV 60 ASAEVMKDYF IGSVLSGGGS VPSKQASAET WINMVNELQK GALSTRLGIP MIYGIDAVHG 120 HNNVYKATIF PHNVGLGATR DPNLVKRIGA ATALEVRATG IPYVFAPCIA VCRDPRWGRC 180 YESYSEDPKL VQAMTEIVSG LQGDIPANSS KGVPFVAGKT KVAACAKHYV GDGGTTKGIN 240 ENNTQISRHG LLSIHMPGYY NSIIKGVSTV MVSYSSWNGV KMHANRDMVT GFLKNILRFK 300 GFVISDWEGI DRITSPPHAN YSYSIQAGIS AGIDMIMVPN NYKEFIDGLT SHVKNKVIPM 360 SRIDDAVTRI LRVKFTMGLF ENPLADNSLV NELGSQEHRE LAREAVRKSL VLLKNGESAA 420 EPLLPLPKKA TKILVAGSHA DNLGYQCGGW TIEWQGLGGN NLTSGTTILT AIKNTVDPST 480 EVVYKENPDA DFVKSNNFSY AIVVVGEPPY AETFGDSLNL TISEPGPSTI QNVCGTVKCV 540 TVIISGRPVV IQPYVSLMDA LVAAWLPGSE GQGVADALFG DYGFTGTLSR TWFKTVDQLP 600 MNIGDQHYDP LFPFGFGLST KPTKTI* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 2.0e-33 | 28 | 619 | 659 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 5.0e-43 | 410 | 619 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 1.0e-73 | 37 | 619 | 658 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-87 | 44 | 452 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-91 | 45 | 373 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 1 | 626 | 1 | 626 | unknown [Populus trichocarpa] |
RefSeq | XP_002266470.1 | 0 | 22 | 624 | 24 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 24 | 626 | 1 | 603 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 9 | 626 | 1 | 613 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525724.1 | 0 | 1 | 624 | 1 | 624 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 22 | 624 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1iex_A | 0 | 22 | 624 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1iew_A | 0 | 22 | 624 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1iev_A | 0 | 22 | 624 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ieq_A | 0 | 22 | 624 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |