Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.019G037400.2 |
Family | GH3 |
Protein Properties | Length: 622 Molecular Weight: 67375.4 Isoelectric Point: 7.8329 |
Chromosome | Chromosome/Scaffold: 19 Start: 4205949 End: 4210954 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 103 | 333 | 0 |
LSTRLGIPMIYGIDAVHGHNNVYKATIFPHNVGLGATRQRIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKLVQAMTEIVSGLQGDIPA NSSKGVPFVAGKTKVAACAKHYVGDGGTTKGINENNTQISRHGLLSIHMPGYYNSIIKGVSTVMVSYSSWNGVKMHANRDMVTGFLKNILRFKGFVISDW EGIDRITSPPHANYSYSIQAGISAGIDMIMV |
Full Sequence |
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Protein Sequence Length: 622 Download |
MARIPIFLMG LVVIWAALAE AEYMIYKDAT KPLNSRIKDL MSRMTLEEKI GQMTQIERGV 60 ASAEVMKDYF IGSVLSGGGS VPSKQASAET WINMVNELQK GALSTRLGIP MIYGIDAVHG 120 HNNVYKATIF PHNVGLGATR QRIGAATALE VRATGIPYVF APCIAVCRDP RWGRCYESYS 180 EDPKLVQAMT EIVSGLQGDI PANSSKGVPF VAGKTKVAAC AKHYVGDGGT TKGINENNTQ 240 ISRHGLLSIH MPGYYNSIIK GVSTVMVSYS SWNGVKMHAN RDMVTGFLKN ILRFKGFVIS 300 DWEGIDRITS PPHANYSYSI QAGISAGIDM IMVPNNYKEF IDGLTSHVKN KVIPMSRIDD 360 AVTRILRVKF TMGLFENPLA DNSLVNELGS QEHRELAREA VRKSLVLLKN GESAAEPLLP 420 LPKKATKILV AGSHADNLGY QCGGWTIEWQ GLGGNNLTSG TTILTAIKNT VDPSTEVVYK 480 ENPDADFVKS NNFSYAIVVV GEPPYAETFG DSLNLTISEP GPSTIQNVCG TVKCVTVIIS 540 GRPVVIQPYV SLMDALVAAW LPGSEGQGVA DALFGDYGFT GTLSRTWFKT VDQLPMNIGD 600 QHYDPLFPFG FGLSTKPTKT I* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 1.0e-32 | 28 | 614 | 659 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 4.0e-43 | 405 | 614 | 228 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PRK15098 | PRK15098 | 2.0e-69 | 37 | 614 | 658 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 2.0e-83 | 44 | 447 | 416 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 3.0e-86 | 45 | 368 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK95015.1 | 0 | 1 | 621 | 1 | 626 | unknown [Populus trichocarpa] |
RefSeq | XP_002266470.1 | 0 | 22 | 619 | 24 | 626 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319151.1 | 0 | 24 | 621 | 1 | 603 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325849.1 | 0 | 9 | 621 | 1 | 613 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525724.1 | 0 | 1 | 619 | 1 | 624 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 22 | 619 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1iex_A | 0 | 22 | 619 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1iew_A | 0 | 22 | 619 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1iev_A | 0 | 22 | 619 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
PDB | 1ieq_A | 0 | 22 | 619 | 1 | 603 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |