| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.019G072800.2 |
| Family | GH116 |
| Protein Properties | Length: 948 Molecular Weight: 106156 Isoelectric Point: 6.1108 |
| Chromosome | Chromosome/Scaffold: 19 Start: 10648630 End: 10655738 |
| Description | Beta-glucosidase, GBA2 type family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH116 | 527 | 885 | 0 |
| GQLLYLEGTEYLMWNTYDVHFYASFALVMLFPKLELNLQRDFAAAVLMHDPSRMQIMSDGKWVPRKVLGAVPHDVGLNDPWFEINAYNLFSTARWKDLNC KFVLQVYRDVVATGDKDFARAVWPSVYVAMAYMDQFDKDGDGMIENEGIPDQTYDTWSVTGVSAYCGGLWVAALQATSAMAHEVGDDGSANYFWIKYQKA KTVYGKLWNGSYFNYDSSGNKSIQADQLAGQWYARACGLSPVVDGDKARKALEKIYEFNVLKVKGGTRGAVNGMLPDGRVDLTAMQTKEIWPGVTYALSA SMIQEGLEEMAFQTAVGIYNAAWSEEGLGYSFQIPESWDMNDQYRSLCYMRPLAIWAMQ | |||
| Full Sequence |
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| Protein Sequence Length: 948 Download |
| MENGLAAAEG EEKLFPDTHA QKVDPGKPAS LTWKRQLNSN GKIPVQFGLS FREISHMLPM 60 GLRLWRHIKQ EAAKERATIF DFSKKHILTS DHGIPLGGIG AGSIGRSYRG EFQHFRLFPG 120 ICEEGPVLAN QFSAFVSRPS GETFSSVLCS RTPDIPKEST GSGIESWDWN LNGQKCTYHA 180 LFPRAWTIYD GAPDPELTIV SRQISPFIPH NYKESSFPVS VFTFTLSNHG KTSADVTLMF 240 TWANSVGGVS GLSGHHFNSK MMTKDGVHAV TLHHKMTNRQ PPVTFAIAAQ ETADVHVSEC 300 PCFLISGDSQ DVSVTAKDMW DVIRKNGTFD QIGCNKTSPS ELGSSIGAAI AASVTVPSGS 360 IRTVTFSLSW DIPEIRFSER SYHRRYTKFY GTLGDAAANI ARDAILEHAN WESQIEAWQR 420 PILEDKRVPE WYPITLFNEL YYLNAGGTIW TDESPPMQNL TAVRERRFSL ERSSSGYKNV 480 NGIAHKNDTA IEILERMAST YEQLHNPVSS NSVFGANLLQ NGEENIGQLL YLEGTEYLMW 540 NTYDVHFYAS FALVMLFPKL ELNLQRDFAA AVLMHDPSRM QIMSDGKWVP RKVLGAVPHD 600 VGLNDPWFEI NAYNLFSTAR WKDLNCKFVL QVYRDVVATG DKDFARAVWP SVYVAMAYMD 660 QFDKDGDGMI ENEGIPDQTY DTWSVTGVSA YCGGLWVAAL QATSAMAHEV GDDGSANYFW 720 IKYQKAKTVY GKLWNGSYFN YDSSGNKSIQ ADQLAGQWYA RACGLSPVVD GDKARKALEK 780 IYEFNVLKVK GGTRGAVNGM LPDGRVDLTA MQTKEIWPGV TYALSASMIQ EGLEEMAFQT 840 AVGIYNAAWS EEGLGYSFQI PESWDMNDQY RSLCYMRPLA IWAMQWALSK PKDFKEEMHH 900 EGIEDESYLK QHAGFSKVAH LLRLPEEEAP KSFFQAVYEF TCKRMLF* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3408 | GDB1 | 2.0e-7 | 585 | 865 | 306 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
| COG4354 | COG4354 | 3.0e-26 | 91 | 453 | 378 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam12215 | GBA2_N | 2.0e-59 | 93 | 413 | 332 | + beta-Glucocerebrosidase 2 N terminal. This domain is found in bacteria, archaea and eukaryotes. This domain is typically between 320 to 354 amino acids in length. This domain is found associated with pfam04685. This domain is found in the protein beta-Glucocerebrosidase 2. It is found just after the extreme N terminus. This protein is located in the ER. The N terminal is thought to be the luminal domain while the C terminal is the cytosolic domain. The catalytic domain of GBA-2 is unknown. | ||
| COG4354 | COG4354 | 6.0e-72 | 526 | 890 | 384 | + Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism] | ||
| pfam04685 | DUF608 | 4.0e-168 | 527 | 886 | 367 | + Protein of unknown function, DUF608. This family represents a conserved region with a pankaryotic distribution in a number of uncharacterized proteins. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004348 | glucosylceramidase activity |
| GO:0006665 | sphingolipid metabolic process |
| GO:0016021 | integral to membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI31319.1 | 0 | 1 | 945 | 1 | 947 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002264575.1 | 0 | 2 | 945 | 3 | 947 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002275782.1 | 0 | 1 | 945 | 17 | 963 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002325943.1 | 0 | 57 | 947 | 1 | 891 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002525532.1 | 0 | 1 | 945 | 2 | 946 | conserved hypothetical protein [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DY292040 | 359 | 540 | 892 | 0 |
| JG703027 | 328 | 545 | 869 | 0 |
| FC917648 | 305 | 540 | 841 | 0 |
| FC895322 | 303 | 400 | 702 | 0 |
| GW866491 | 289 | 541 | 829 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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