y
Basic Information | |
---|---|
Species | Populus trichocarpa |
Cazyme ID | Potri.019G121700.1 |
Family | AA1 |
Protein Properties | Length: 577 Molecular Weight: 63900.9 Isoelectric Point: 8.0837 |
Chromosome | Chromosome/Scaffold: 19 Start: 14991066 End: 14993486 |
Description | laccase 3 |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
AA1 | 33 | 562 | 0 |
ETHYHEFVIQAKPVRRLCRTHNTITVNGLFPGPTLEVRDGDTLVIKAINNARYNVTLHWHGVRQLRNPWADGPDRVTQCPIQPGRSYTYRFTIENQEGTL WWHAHSRWLRATVYGALIIHPKLGSPYSFPMPIREIPILLGEWWVRNPMDVLRLADFTGAAPNVSDAYTINGQPGDLYRCSKQETVRFPVDPGETILLRV INSAMNQELFFAVANHILTVVAVDAACTMPFATSFIMIAPGQTTNVLLTADQTPGHYYMAAHAYNSANAPFDNTTTTAILEYKSAPCNANKGKSSTPIFP QLPGFNDTNSAIAFTSSLRSPSKVNVPLQIDENLFFTVGFGLINCTNPNSPRCQGPNGTRFAASINNVSFVLPTRNSLMQAYYQGQPGVFTTDFPPVPPV KFDYTGNVSRGLWQPVKATKLYKLKFGAKVQIVFQDTSIVTVEDHPMHLHGHNFAVVGSGFGNFNPQTDPAKFNLINPPYRNTIGNPPGGWVAIRFVADN PGIWLLHCHLDSHLNWGLAMAFLVENGVGN |
Full Sequence |
---|
Protein Sequence Length: 577 Download |
METHNLTVKQ LYCCLLLSIF VIISFQASSS EPETHYHEFV IQAKPVRRLC RTHNTITVNG 60 LFPGPTLEVR DGDTLVIKAI NNARYNVTLH WHGVRQLRNP WADGPDRVTQ CPIQPGRSYT 120 YRFTIENQEG TLWWHAHSRW LRATVYGALI IHPKLGSPYS FPMPIREIPI LLGEWWVRNP 180 MDVLRLADFT GAAPNVSDAY TINGQPGDLY RCSKQETVRF PVDPGETILL RVINSAMNQE 240 LFFAVANHIL TVVAVDAACT MPFATSFIMI APGQTTNVLL TADQTPGHYY MAAHAYNSAN 300 APFDNTTTTA ILEYKSAPCN ANKGKSSTPI FPQLPGFNDT NSAIAFTSSL RSPSKVNVPL 360 QIDENLFFTV GFGLINCTNP NSPRCQGPNG TRFAASINNV SFVLPTRNSL MQAYYQGQPG 420 VFTTDFPPVP PVKFDYTGNV SRGLWQPVKA TKLYKLKFGA KVQIVFQDTS IVTVEDHPMH 480 LHGHNFAVVG SGFGNFNPQT DPAKFNLINP PYRNTIGNPP GGWVAIRFVA DNPGIWLLHC 540 HLDSHLNWGL AMAFLVENGV GNLQSVQPPP LDLPQC* 600 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 2.0e-51 | 40 | 154 | 117 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 1.0e-68 | 16 | 554 | 567 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-70 | 15 | 565 | 580 | + oxidoreductase | ||
TIGR03388 | ascorbase | 7.0e-85 | 50 | 560 | 549 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 33 | 576 | 548 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180580.1 | 0 | 16 | 576 | 9 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
RefSeq | NP_196330.3 | 0 | 15 | 576 | 9 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
RefSeq | XP_002319955.1 | 0 | 1 | 576 | 1 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326089.1 | 0 | 1 | 576 | 1 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516345.1 | 0 | 1 | 576 | 1 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 50 | 554 | 19 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asq_A | 0 | 50 | 554 | 19 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_B | 0 | 50 | 554 | 19 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_A | 0 | 50 | 554 | 19 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1aso_B | 0 | 50 | 554 | 19 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |