Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.019G121700.3 |
Family | AA1 |
Protein Properties | Length: 415 Molecular Weight: 45223.5 Isoelectric Point: 7.0376 |
Chromosome | Chromosome/Scaffold: 19 Start: 14991001 End: 14993541 |
Description | laccase 3 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 4 | 400 | 0 |
REIPILLGEWWVRNPMDVLRLADFTGAAPNVSDAYTINGQPGDLYRCSKQETVRFPVDPGETILLRVINSAMNQELFFAVANHILTVVAVDAACTMPFAT SFIMIAPGQTTNVLLTADQTPGHYYMAAHAYNSANAPFDNTTTTAILEYKSAPCNANKGKSSTPIFPQLPGFNDTNSAIAFTSSLRSPSKVNVPLQIDEN LFFTVGFGLINCTNPNSPRCQGPNGTRFAASINNVSFVLPTRNSLMQAYYQGQPGVFTTDFPPVPPVKFDYTGNVSRGLWQPVKATKLYKLKFGAKVQIV FQDTSIVTVEDHPMHLHGHNFAVVGSGFGNFNPQTDPAKFNLINPPYRNTIGNPPGGWVAIRFVADNPGIWLLHCHLDSHLNWGLAMAFLVENGVGN |
Full Sequence |
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Protein Sequence Length: 415 Download |
MPIREIPILL GEWWVRNPMD VLRLADFTGA APNVSDAYTI NGQPGDLYRC SKQETVRFPV 60 DPGETILLRV INSAMNQELF FAVANHILTV VAVDAACTMP FATSFIMIAP GQTTNVLLTA 120 DQTPGHYYMA AHAYNSANAP FDNTTTTAIL EYKSAPCNAN KGKSSTPIFP QLPGFNDTNS 180 AIAFTSSLRS PSKVNVPLQI DENLFFTVGF GLINCTNPNS PRCQGPNGTR FAASINNVSF 240 VLPTRNSLMQ AYYQGQPGVF TTDFPPVPPV KFDYTGNVSR GLWQPVKATK LYKLKFGAKV 300 QIVFQDTSIV TVEDHPMHLH GHNFAVVGSG FGNFNPQTDP AKFNLINPPY RNTIGNPPGG 360 WVAIRFVADN PGIWLLHCHL DSHLNWGLAM AFLVENGVGN LQSVQPPPLD LPQC* 420 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam07731 | Cu-oxidase_2 | 9.0e-40 | 275 | 398 | 124 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
pfam00394 | Cu-oxidase | 7.0e-40 | 4 | 155 | 156 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. |
PLN02604 | PLN02604 | 1.0e-41 | 60 | 403 | 351 | + oxidoreductase |
TIGR03388 | ascorbase | 4.0e-52 | 58 | 398 | 354 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 2 | 414 | 417 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_180580.1 | 0 | 1 | 414 | 156 | 570 | LAC3 (laccase 3); laccase [Arabidopsis thaliana] |
RefSeq | NP_196330.3 | 0 | 1 | 414 | 154 | 569 | LAC13 (laccase 13); laccase [Arabidopsis thaliana] |
RefSeq | XP_002319955.1 | 0 | 1 | 414 | 163 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002326089.1 | 0 | 1 | 414 | 163 | 576 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516345.1 | 0 | 1 | 414 | 163 | 577 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 2e-39 | 5 | 392 | 136 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asq_A | 2e-39 | 5 | 392 | 136 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_B | 2e-39 | 5 | 392 | 136 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1asp_A | 2e-39 | 5 | 392 | 136 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
PDB | 1aso_B | 2e-39 | 5 | 392 | 136 | 521 | A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV136233 | 239 | 1 | 237 | 0 |
DY297248 | 328 | 55 | 380 | 0 |
EX274037 | 310 | 89 | 396 | 0 |
DV141384 | 217 | 1 | 215 | 0 |
FC900507 | 290 | 55 | 342 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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