Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T009900.1 |
Family | CBM57 |
Protein Properties | Length: 654 Molecular Weight: 73448.6 Isoelectric Point: 9.0947 |
Chromosome | Chromosome/Scaffold: 24 Start: 563360 End: 570864 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 324 | 494 | 4.7e-26 |
HINCGGQDVKNGKILYEGDQDSGSNAAARCYNRSGSNWGFSSTGDFMDDENFYDNKYTLQSNANISLVDFGLYATARKTPLSITYYGYCLENGNYTVRLH FAEIQFTDEKLYNKVARRVFDIYIQGIQVRKDFNFTKAVQGSNRSFTRAFNTTVTDRTLEIRLYWAGKGTT |
Full Sequence |
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Protein Sequence Length: 654 Download |
MISFFRLIIP IKIHLPLKDY SLPGRLPPEL ANLTYVQKID FTRNYLYGTI PVEWASMKNL 60 SFISLTANRL SGNIPGHLGS FTALTYLSLE SNQFSGVVPP ELGKLVNLKS LILSGNKLVG 120 TLPEALAQIK DLKDFRVSDN NLNGTVPEFI GNWTQLQKLE LYATGLQGPI PLPIFHLEKL 180 SDLRIADMPG PEFQLPNSPI ERQFLVLRNI NLTGTIPENA WKVEKTLDLN FNKLVGEIPP 240 NTIRRRQFTF LSGNKLTGTV QDSFLQNSPN LDVSYNNFSR SPRCSSSNEN NINWFRSSSS 300 NNKLSDLLPC SGISRCPKYY RSFHINCGGQ DVKNGKILYE GDQDSGSNAA ARCYNRSGSN 360 WGFSSTGDFM DDENFYDNKY TLQSNANISL VDFGLYATAR KTPLSITYYG YCLENGNYTV 420 RLHFAEIQFT DEKLYNKVAR RVFDIYIQGI QVRKDFNFTK AVQGSNRSFT RAFNTTVTDR 480 TLEIRLYWAG KGTTVIPIRG NYGPIISAIS VCSEPEETSK KPIVIGVVTS AVFLIFLVMG 540 VIYWKLCYGD KYTRERELKG LDLKTGSFTL RQLKAATDNF NSENKIGEGG FGSVYKGELA 600 DGTIIAVKQL SPKSRQGNRE FVNEIGIISC LQHLIWDDQA MQISHEKNQS RQE* 660 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN00113 | PLN00113 | 6.0e-21 | 19 | 186 | 168 | + leucine-rich repeat receptor-like protein kinase; Provisional |
PLN00113 | PLN00113 | 3.0e-28 | 22 | 279 | 282 | + leucine-rich repeat receptor-like protein kinase; Provisional |
PLN00113 | PLN00113 | 4.0e-32 | 22 | 279 | 274 | + leucine-rich repeat receptor-like protein kinase; Provisional |
PLN00113 | PLN00113 | 9.0e-36 | 39 | 271 | 243 | + leucine-rich repeat receptor-like protein kinase; Provisional |
pfam11721 | Malectin | 1.0e-47 | 322 | 509 | 191 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0004672 | protein kinase activity |
GO:0005515 | protein binding |
GO:0005524 | ATP binding |
GO:0006468 | protein phosphorylation |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002317319.1 | 0 | 17 | 633 | 81 | 677 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317383.1 | 0.00000000009 | 14 | 147 | 111 | 242 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002317383.1 | 0 | 17 | 633 | 42 | 610 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332248.1 | 0 | 17 | 633 | 23 | 616 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522278.1 | 0 | 17 | 633 | 92 | 702 | kinase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 3e-17 | 14 | 175 | 395 | 556 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 0.000000000000006 | 14 | 309 | 224 | 504 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 0.0000000000003 | 36 | 171 | 393 | 528 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 0.0000000000005 | 11 | 147 | 418 | 552 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |
PDB | 3rj0_A | 0.0000000000009 | 24 | 231 | 354 | 566 | B Chain B, The Avrptob-Bak1 Complex Reveals Two Structurally Similar Kinaseinteracting Domains In A Single Type Iii Effector |