y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T018000.1 |
Family | GH1 |
Protein Properties | Length: 523 Molecular Weight: 60075.1 Isoelectric Point: 6.2435 |
Chromosome | Chromosome/Scaffold: 27 Start: 148274 End: 150942 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 9 | 488 | 0 |
RNSFPDDFVFGTSSSAYQYEGETNKHGRGPAIWDTFTVEHTERINDHSNGNVAVDFYHRYKEDVQRMKEMGMDAFRFSISWSRVLPRVYYGRLSAGVNEE GIKFYNDLIDDLLKNGLQPYVTLFHWDTPQALEDKYGGFLSPNIVNDFRDFVDLCFQNFGDRVKKWITLNEPWMFSVQGYDMGTMAPGRISVVVNDPHRS LNTGATEVYTVSHHLLLAHAAAVKLYKEKYQSCQGGQIGITLVSHWFEPYSNSEADQNATKRSLDFMLGWFMDPLTNGDYPRNMHDFVGGRLPEFTAEES KMLKGSYDFIGINYYTTYYAQNIDANYQSVGFMSDARANWTGERNGIPIGPQAGVKWLYIYPEGISRLLNYTKDLYGSPTIYITENGVDDVNNNASSLKE ALNDPIREKSYKDHLKNVLRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDYKNDLKRYPKQSVKWFKQFLRRD |
Full Sequence |
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Protein Sequence Length: 523 Download |
MGSIDDFSRN SFPDDFVFGT SSSAYQYEGE TNKHGRGPAI WDTFTVEHTE RINDHSNGNV 60 AVDFYHRYKE DVQRMKEMGM DAFRFSISWS RVLPRVYYGR LSAGVNEEGI KFYNDLIDDL 120 LKNGLQPYVT LFHWDTPQAL EDKYGGFLSP NIVNDFRDFV DLCFQNFGDR VKKWITLNEP 180 WMFSVQGYDM GTMAPGRISV VVNDPHRSLN TGATEVYTVS HHLLLAHAAA VKLYKEKYQS 240 CQGGQIGITL VSHWFEPYSN SEADQNATKR SLDFMLGWFM DPLTNGDYPR NMHDFVGGRL 300 PEFTAEESKM LKGSYDFIGI NYYTTYYAQN IDANYQSVGF MSDARANWTG ERNGIPIGPQ 360 AGVKWLYIYP EGISRLLNYT KDLYGSPTIY ITENGVDDVN NNASSLKEAL NDPIREKSYK 420 DHLKNVLRSI NEHGVDVKGF FAWSLMDNFE WGSGYAVRFG LYYVDYKNDL KRYPKQSVKW 480 FKQFLRRDSH SPIPHTYPLI TSNETSKIED SLVRDAKRPR NA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 5.0e-123 | 5 | 489 | 491 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 3.0e-123 | 4 | 485 | 491 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-129 | 9 | 483 | 491 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 4.0e-148 | 13 | 481 | 473 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 4.0e-172 | 8 | 487 | 487 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330982.1 | 0 | 1 | 522 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330983.1 | 0 | 8 | 485 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 1 | 522 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332805.1 | 0 | 8 | 485 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332916.1 | 0 | 101 | 489 | 1 | 389 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 8 | 487 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptq_A | 0 | 8 | 487 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_B | 0 | 8 | 487 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptm_A | 0 | 8 | 487 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
PDB | 3ptk_B | 0 | 8 | 487 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794849 | 472 | 4 | 475 | 0 |
HO779715 | 450 | 26 | 475 | 0 |
DT501012 | 241 | 1 | 241 | 0 |
EE590590 | 485 | 7 | 490 | 0 |
FG227815 | 483 | 6 | 486 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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