y
Basic Information | |
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Species | Populus trichocarpa |
Cazyme ID | Potri.T018600.1 |
Family | GH1 |
Protein Properties | Length: 520 Molecular Weight: 59660.7 Isoelectric Point: 6.205 |
Chromosome | Chromosome/Scaffold: 27 Start: 238594 End: 241278 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 9 | 485 | 0 |
RNSFPDDFVFGTSSSAYQYEGETNKHGRGPAIWDTFTVEHTERINDHSNGNVAVDFYHRYKEDVQRMKEMGMDAFRFSISWSRVLPHGRLSAGVNEEGIK FYNDLIDDLLKNGLQPYVTLFHWDTPQALEDKYGGFLSPNIVNDFRDFVDLCFQNFGDRVKKWITLNEPWMFSVQGYDMGTMAPGRISVVVNDPHRSLNT GATEVYMVSHHLLLAHAAAVKLYKEKYQSCQGGQIGITLVSHWFEPYSNSEADQNATKRSLDFMLGWFMDPLTNGDYPRNMHDFVGGRLPEFTAEESKML KGSYDFIGINYYTTYYAQNIDANYQSVGFMSDARANWTGERNGIPIGPQAGVKWLYIYPEGISRLLNYTKDLYGSPTIYITENGVDDVNNNASSLKEALN DPIREKSYKDHLKNVLRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDYKNDLKRYPKQSVKWFKQFLRRD |
Full Sequence |
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Protein Sequence Length: 520 Download |
MGSIDDFSRN SFPDDFVFGT SSSAYQYEGE TNKHGRGPAI WDTFTVEHTE RINDHSNGNV 60 AVDFYHRYKE DVQRMKEMGM DAFRFSISWS RVLPHGRLSA GVNEEGIKFY NDLIDDLLKN 120 GLQPYVTLFH WDTPQALEDK YGGFLSPNIV NDFRDFVDLC FQNFGDRVKK WITLNEPWMF 180 SVQGYDMGTM APGRISVVVN DPHRSLNTGA TEVYMVSHHL LLAHAAAVKL YKEKYQSCQG 240 GQIGITLVSH WFEPYSNSEA DQNATKRSLD FMLGWFMDPL TNGDYPRNMH DFVGGRLPEF 300 TAEESKMLKG SYDFIGINYY TTYYAQNIDA NYQSVGFMSD ARANWTGERN GIPIGPQAGV 360 KWLYIYPEGI SRLLNYTKDL YGSPTIYITE NGVDDVNNNA SSLKEALNDP IREKSYKDHL 420 KNVLRSINEH GVDVKGFFAW SLMDNFEWGS GYAVRFGLYY VDYKNDLKRY PKQSVKWFKQ 480 FLRRDSHSPI PHTYPLITSN ETSKIEDSLV RDAKRPRNA* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 1.0e-125 | 5 | 486 | 488 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 4.0e-126 | 4 | 482 | 488 | + beta-glucosidase | ||
COG2723 | BglB | 4.0e-131 | 9 | 480 | 488 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 4.0e-150 | 13 | 478 | 470 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 1.0e-173 | 8 | 484 | 484 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002330982.1 | 0 | 1 | 519 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330983.1 | 0 | 8 | 482 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002330984.1 | 0 | 1 | 519 | 1 | 519 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332805.1 | 0 | 8 | 482 | 1 | 475 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002332916.1 | 0 | 98 | 486 | 1 | 389 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 8 | 484 | 30 | 505 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3ptq_A | 0 | 8 | 484 | 30 | 505 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3ptm_B | 0 | 8 | 484 | 30 | 505 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3ptm_A | 0 | 8 | 484 | 30 | 505 | A Chain A, Glactose Oxidase C383s Mutant Identified By Directed Evolution |
PDB | 3ptk_B | 0 | 8 | 484 | 30 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO794849 | 469 | 4 | 472 | 0 |
HO779715 | 447 | 26 | 472 | 0 |
DT501012 | 238 | 1 | 238 | 0 |
EE590590 | 482 | 7 | 487 | 0 |
FG227815 | 480 | 6 | 483 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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