| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.T087500.1 |
| Family | GH127 |
| Protein Properties | Length: 850 Molecular Weight: 94862.2 Isoelectric Point: 6.7922 |
| Chromosome | Chromosome/Scaffold: 102 Start: 112589 End: 117259 |
| Description | Putative glycosyl hydrolase of unknown function (DUF1680) |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GH127 | 332 | 616 | 5.3e-23 |
| IGAQMRYEITGDPLYKDIGAFFMDVVNSSHSYATGGTSVSEFWSDPKRLASTLQTENEESCTTYNMLKVSRHLFRWTKEMAYADYYERALTNGVLGIQRG TEPGVMIYMLPQYPGSSKAKSYHGWGTSYDSFWCCYGTGIESFSKLGDSIYFEEGEAPGLYIIQYISSSLDWKSGQIVLSQKVDPIVSSDPYLRVTLTFS PKKGTSQASTLYLRIPIWTNSEGATATINSQSLRLPAPGSFLSVNRKWRSSDKLTLQIPISLRTEAIKDERHEYASVQAILYGPY | |||
| Full Sequence |
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| Protein Sequence Length: 850 Download |
| MVSMLCSFGI SKECTNIPTQ LSSHSFRYEL LSSQNETWKE EMFEHYHLIP TDDSAWSSLL 60 PRKILREEDE HSWEMMYRNL KSPLKSSGNF LNEMSLHNVR LDPSSIHWKA QQTNLEYLLM 120 LDVNNLVWSF RKTAGSSTPG KAYGGWEKPD SELRGHFVGH YLSASAQMWA STHNETLKKK 180 MSAVVSALSA CQVKMGTGYL SAFPSELFDR FEAIKPVWAP YYTIHKILAG LLDQYTLADN 240 AQALKMVKWM VDYFYNRVRN VITNYSVERH YLSLNEETGG MNDVLYKLFS ITIQSIWCWL 300 TLFDKPCFLG LLAVQADDIS GFHANTHIPV VIGAQMRYEI TGDPLYKDIG AFFMDVVNSS 360 HSYATGGTSV SEFWSDPKRL ASTLQTENEE SCTTYNMLKV SRHLFRWTKE MAYADYYERA 420 LTNGVLGIQR GTEPGVMIYM LPQYPGSSKA KSYHGWGTSY DSFWCCYGTG IESFSKLGDS 480 IYFEEGEAPG LYIIQYISSS LDWKSGQIVL SQKVDPIVSS DPYLRVTLTF SPKKGTSQAS 540 TLYLRIPIWT NSEGATATIN SQSLRLPAPG SFLSVNRKWR SSDKLTLQIP ISLRTEAIKD 600 ERHEYASVQA ILYGPYLLAG HTSGDWNLKS GSGNSLSDSI TPIPGSYNGQ LVSFSQESGI 660 STFVLTNSNQ SISMEKLPES GTDASLQATF RLVFKDSSSS KLSSVKDVIG KSVMLEPFHL 720 PGMLLVQQGK DRSFTLTNSA DDDGSSIFRV VSGLDGKDGT VSLESGIQNG CYVYSGVDYK 780 SGQSMKLSCK SGSSSDTGFN QGASFVMNKG LSQYHPISFV AKGDKRNFLL APLHSLRDES 840 YTIYFNIQP* |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG3533 | COG3533 | 6.0e-62 | 96 | 625 | 540 | + Uncharacterized protein conserved in bacteria [Function unknown] | ||
| pfam07944 | DUF1680 | 1.0e-160 | 98 | 619 | 533 | + Putative glycosyl hydrolase of unknown function (DUF1680). The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One members of this family is annotated as a possible arabinosidase, but no references were found to back this. These proteins are related to a large family of glycosyl hydrolases. | ||
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI16413.1 | 0 | 4 | 737 | 17 | 749 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002283032.1 | 0 | 5 | 848 | 92 | 939 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002285548.1 | 0 | 4 | 848 | 17 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297785.1 | 0 | 1 | 848 | 9 | 857 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002304762.1 | 0 | 1 | 849 | 9 | 858 | predicted protein [Populus trichocarpa] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| ES803398 | 310 | 78 | 386 | 0 |
| DR459841 | 291 | 101 | 388 | 0 |
| JG224039 | 311 | 383 | 691 | 0 |
| GO843439 | 335 | 302 | 635 | 0 |
| JK989006 | 318 | 330 | 645 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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