| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.T101200.1 |
| Family | GH14 |
| Protein Properties | Length: 236 Molecular Weight: 26572.7 Isoelectric Point: 7.6272 |
| Chromosome | Chromosome/Scaffold: 146 Start: 6537 End: 8055 |
| Description | beta-amylase 5 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 83 | 221 | 0 |
| YVMLPLRVVTADNVFEGGEKLEKQLKDLRAAGIDGVMVDVWWGIIEAKGPKQYEWSAYRSLFELVNKCDLKIQAIMSFHQCGGNVGDVVYIPIPQWVRDI GETDPDIFYTNRSGNRNEEYLSLGVDHQPLFGGRTAIEV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 236 Download |
| MTSIIYPTPG ALREKMRLHH RHLLWELPLI YRGESALVKR VKHRVARSKA REPQAVAFEV 60 STAASEGGSK YDEKLLQNYV PLYVMLPLRV VTADNVFEGG EKLEKQLKDL RAAGIDGVMV 120 DVWWGIIEAK GPKQYEWSAY RSLFELVNKC DLKIQAIMSF HQCGGNVGDV VYIPIPQWVR 180 DIGETDPDIF YTNRSGNRNE EYLSLGVDHQ PLFGGRTAIE VSLISNPIPV VHCIV* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 1.0e-42 | 79 | 221 | 143 | + beta-amylase | ||
| PLN00197 | PLN00197 | 9.0e-50 | 47 | 220 | 177 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 5.0e-52 | 57 | 221 | 165 | + beta-amylase | ||
| PLN02905 | PLN02905 | 3.0e-53 | 79 | 221 | 143 | + beta-amylase | ||
| PLN02801 | PLN02801 | 2.0e-109 | 66 | 221 | 156 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY40266.1 | 0 | 72 | 221 | 5 | 154 | beta-amylase [Glycine max] |
| Swiss-Prot | O22585 | 0 | 72 | 221 | 5 | 154 | AMYB_MEDSA RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
| Swiss-Prot | O64407 | 0 | 72 | 221 | 5 | 154 | AMYB_VIGUN RecName: Full=Beta-amylase; AltName: Full=1,4-alpha-D-glucan maltohydrolase |
| RefSeq | XP_002327920.1 | 0 | 66 | 221 | 2 | 157 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515712.1 | 0 | 66 | 221 | 2 | 157 | Beta-amylase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1fa2_A | 0 | 78 | 221 | 11 | 154 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1byd_A | 0 | 72 | 221 | 4 | 153 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1byc_A | 0 | 72 | 221 | 4 | 153 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1byb_A | 0 | 72 | 221 | 4 | 153 | A Chain A, Crystal Structure Of Beta-Amylase From Sweet Potato |
| PDB | 1bya_A | 0 | 72 | 221 | 4 | 153 | A Chain A, Crystal Structures Of Soybean Beta-Amylase Reacted With Beta-Maltose And Maltal: Active Site Components And Their Apparent Role In Catalysis |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| starch degradation I | RXN-1827 | EC-3.2.1.2 | β-amylase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DT502468 | 156 | 66 | 221 | 0 |
| BU820258 | 156 | 66 | 221 | 0 |
| BU820193 | 156 | 66 | 221 | 0 |
| BU820386 | 156 | 66 | 221 | 0 |
| BU820171 | 144 | 66 | 209 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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