| Basic Information | |
|---|---|
| Species | Populus trichocarpa |
| Cazyme ID | Potri.T144300.1 |
| Family | GH5 |
| Protein Properties | Length: 536 Molecular Weight: 60213.9 Isoelectric Point: 6.8132 |
| Chromosome | Chromosome/Scaffold: 407 Start: 18214 End: 20237 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 39 | 350 | 3.4e-31 |
| RTGERVKLHCANWPAHVFPMLAEGLDKQPLPFIASEIVKNNYNCIRFTFSIHMFTRYANLTIEESFDRLNLKKAKAGVIKHNPFVLKMTVPQAYEAVVDV LGSYGIMIDADNHISEPIWCCSNDDENGFPNDPHFDPEEWIEGLKLVAQRFKGKSQLISIGLRNEPRGKNQNATLWFDHYIMEAAAQVHQANPDVLVIAS GLNFATDLTYFKKHSLKSNFDNKLIFEGHSYSWGGKGNPWVDGSVNKACADKIGSLNNNLAFVTDGENAVPLFFSEFGIDRKQMPAGDDRFLSCFSTWAA EKDLDWGLWALQ | |||
| Full Sequence |
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| Protein Sequence Length: 536 Download |
| MKMLGKNFQA ILLFSFILYA VPCYSLPLKT QGRWLVDERT GERVKLHCAN WPAHVFPMLA 60 EGLDKQPLPF IASEIVKNNY NCIRFTFSIH MFTRYANLTI EESFDRLNLK KAKAGVIKHN 120 PFVLKMTVPQ AYEAVVDVLG SYGIMIDADN HISEPIWCCS NDDENGFPND PHFDPEEWIE 180 GLKLVAQRFK GKSQLISIGL RNEPRGKNQN ATLWFDHYIM EAAAQVHQAN PDVLVIASGL 240 NFATDLTYFK KHSLKSNFDN KLIFEGHSYS WGGKGNPWVD GSVNKACADK IGSLNNNLAF 300 VTDGENAVPL FFSEFGIDRK QMPAGDDRFL SCFSTWAAEK DLDWGLWALQ GSYYLRQNVT 360 NMEEYFGVLE IDWDRVKNPE VERRLGLLKQ TLLDPKSTAP LNYIMYHPQS GACVGEGMDG 420 QIRAGNCKGL TRWTHNGHEG PLELKRTGLC LKAIGDGLPP ILTPDCSQTT WKPISASKLH 480 LASKDHKGEY LCLHLEPPFA GNIVTKKCIC VGGDPTCKDN PTSQWFKLIE TNIEN* 540 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG2730 | BglC | 0.0007 | 118 | 236 | 122 | + Endoglucanase [Carbohydrate transport and metabolism] | ||
| pfam00150 | Cellulase | 3.0e-8 | 161 | 349 | 199 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI34404.1 | 0 | 6 | 533 | 21 | 560 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272534.1 | 0 | 6 | 533 | 5 | 544 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298005.1 | 0 | 1 | 535 | 1 | 535 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002509877.1 | 0 | 9 | 533 | 3 | 546 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| RefSeq | XP_002509879.1 | 0 | 33 | 534 | 32 | 536 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.00003 | 30 | 395 | 8 | 357 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.00003 | 30 | 395 | 8 | 357 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.00006 | 30 | 395 | 8 | 357 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.00006 | 30 | 395 | 8 | 357 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| BU885497 | 240 | 1 | 240 | 0 |
| DN501931 | 210 | 327 | 536 | 0 |
| BU877706 | 203 | 334 | 536 | 0 |
| CK114130 | 181 | 327 | 507 | 0 |
| CK114130 | 31 | 506 | 536 | 0.000000004 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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